Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7393

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7392: 15760 - Hypothetical Protein, at 171609 to 172297 15760 mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172471 to 174336 15761 mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175289 to 177598 15762

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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171,486 - -1.0
172,071 + 15760 mRNA_7392 0.67 0.5
172,940 - 15761 mRNA_7393 0.25 0.1
173,243 - 15761 mRNA_7393 0.41 -0.2
173,678 - 15761 mRNA_7393 0.65 -0.7
173,843 + 15761 mRNA_7393 0.74 1.7
173,843 + 15761 mRNA_7393 0.74 -0.4
174,017 + 15761 mRNA_7393 0.83 1.5
174,264 - -0.3
174,288 + 0.8
174,408 - -0.6
174,445 + 1.5
174,446 + 0.5
174,569 - 0.2
174,579 - -1.2
174,582 - 1.1
174,584 - -0.8
174,593 + -0.3
174,597 - -0.7
174,601 + -0.6
174,606 - -1.4
174,618 - 0.6
174,622 + 0.8
174,622 + 0.3
174,634 + 1.5
174,636 + -0.4
174,639 - -1.2
174,652 - 0.3
174,662 - -0.5
174,707 + 0.1
174,713 + -0.5
174,730 - 1.3
174,747 - -1.9
174,749 - -0.8
174,812 + -2.6
174,815 + -0.1
174,826 + -0.1
174,852 + 0.3
174,852 + -0.0
174,853 - 0.3
174,861 - -0.0
174,866 - 0.1
174,877 + 0.2
174,888 - 1.0
174,889 - -0.8
174,893 + 0.9
174,893 - 1.4
174,898 + 0.6
174,907 + 0.3
174,911 - 0.2
174,912 - 0.0
174,912 - -1.9
174,914 + 0.7
174,919 + 1.2
174,927 + 0.7
174,939 + -1.9
174,942 + 0.0
175,026 - -3.4
175,055 + 0.3
175,071 - -1.0
175,077 - 1.0
175,079 - 0.6
175,215 - 0.5
175,222 + -0.6