Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6864

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6862: 15230 - KOG0754 Mitochondrial oxodicarboxylate carrier protein, at 303833 to 305130 15230 mRNA_6863: 15231 - HMMPfam-Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like-PF05365,SUPERFAMILY--SSF81514, at 305544 to 305791 15231 mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305954 to 308144 15232 mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308236 to 309069 15233

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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305,036 - 0.0
305,038 - -2.0
305,225 + -0.8
305,235 - 1.9
305,342 - -1.7
305,350 + -0.2
305,374 - 2.7
305,463 - -0.9
306,223 + 15232 mRNA_6864 0.12 -0.4
306,243 - 15232 mRNA_6864 0.13 -0.2
306,250 + 15232 mRNA_6864 0.14 0.2
306,372 + 15232 mRNA_6864 0.19 -0.8
306,396 - 15232 mRNA_6864 0.20 -1.3
306,412 - 15232 mRNA_6864 0.21 -0.7
306,660 + 15232 mRNA_6864 0.32 0.1
306,687 - 15232 mRNA_6864 0.33 -0.1
306,694 + 15232 mRNA_6864 0.34 -2.9
306,764 - 15232 mRNA_6864 0.37 -0.4
306,950 - 15232 mRNA_6864 0.45 0.6
306,959 + 15232 mRNA_6864 0.46 -0.4
306,969 - 15232 mRNA_6864 0.46 -0.0
307,105 - 15232 mRNA_6864 0.53 0.8
307,115 + 15232 mRNA_6864 0.53 -2.9
307,116 - 15232 mRNA_6864 0.53 0.0
307,408 - 15232 mRNA_6864 0.66 0.3
307,416 - 15232 mRNA_6864 0.67 -1.3
307,536 - 15232 mRNA_6864 0.72 0.1
307,575 - 15232 mRNA_6864 0.74 0.5
307,701 + 15232 mRNA_6864 0.80 0.6
307,702 + 15232 mRNA_6864 0.80 2.6
307,975 - -1.2
307,993 - -0.0
307,998 - 0.5
308,002 + -1.6
308,003 + -2.2
309,141 - 0.4