Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6856

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6855: 15223 - KOG1601 GATA-4/5/6 transcription factors, at 282233 to 283773 15223 mRNA_6856: 15224 - K10395 KIF4_21_27 kinesin family member 4/21/27, at 284062 to 291229 15224

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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283,072 + 15223 mRNA_6855 0.54 -0.2
283,225 - 15223 mRNA_6855 0.64 -2.6
283,306 + 15223 mRNA_6855 0.70 -0.7
283,374 + 15223 mRNA_6855 0.74 -2.1
283,528 - 15223 mRNA_6855 0.84 -0.1
283,671 - -1.1
283,675 + 0.2
283,681 - 0.0
283,682 - 1.5
283,684 - -1.2
283,687 - 0.6
283,703 + -2.0
283,710 - 0.2
283,718 + 0.6
283,834 + 0.8
283,985 + 0.4
283,989 - -0.7
283,991 - 0.4
283,991 + 0.7
284,019 - -1.0
284,134 - 0.8
284,136 - -0.1
284,286 - 0.4
284,468 - 0.6
284,652 + 1.1
284,858 - 15224 mRNA_6856 0.11 0.4
284,911 + 15224 mRNA_6856 0.12 -0.6
285,014 + 15224 mRNA_6856 0.13 -1.4
285,319 - 15224 mRNA_6856 0.18 -2.6
285,337 - 15224 mRNA_6856 0.18 1.8
285,396 + 15224 mRNA_6856 0.19 -1.0
285,603 - 15224 mRNA_6856 0.21 -1.0
285,605 + 15224 mRNA_6856 0.22 -0.7
285,861 - 15224 mRNA_6856 0.25 0.9
286,103 + 15224 mRNA_6856 0.28 0.8
286,218 + 15224 mRNA_6856 0.30 1.2
286,221 + 15224 mRNA_6856 0.30 0.4
286,246 + 15224 mRNA_6856 0.30 -0.5
286,372 - 15224 mRNA_6856 0.32 -2.2
286,373 + 15224 mRNA_6856 0.32 -0.8
286,565 + 15224 mRNA_6856 0.35 -0.1
286,578 - 15224 mRNA_6856 0.35 0.7
286,637 - 15224 mRNA_6856 0.36 -1.3
286,715 + 15224 mRNA_6856 0.37 0.6
286,721 + 15224 mRNA_6856 0.37 -1.7
286,773 + 15224 mRNA_6856 0.38 0.6
286,795 - 15224 mRNA_6856 0.38 -0.3
286,972 + 15224 mRNA_6856 0.41 -1.1
287,068 + 15224 mRNA_6856 0.42 -0.1
287,125 - 15224 mRNA_6856 0.43 -1.5
287,133 + 15224 mRNA_6856 0.43 0.2
287,144 - 15224 mRNA_6856 0.43 0.7
287,584 - 15224 mRNA_6856 0.49 0.1
287,615 + 15224 mRNA_6856 0.50 -0.7
287,619 + 15224 mRNA_6856 0.50 -1.1
287,860 + 15224 mRNA_6856 0.53 -0.4
287,924 - 15224 mRNA_6856 0.54 -0.4
288,249 - 15224 mRNA_6856 0.58 0.4
288,326 - 15224 mRNA_6856 0.59 0.4
288,401 + 15224 mRNA_6856 0.61 0.8
288,416 - 15224 mRNA_6856 0.61 1.1
288,688 + 15224 mRNA_6856 0.65 -0.8
288,693 + 15224 mRNA_6856 0.65 0.6
288,797 + 15224 mRNA_6856 0.66 0.2
289,385 - 15224 mRNA_6856 0.74 -0.5
289,601 + 15224 mRNA_6856 0.77 1.1
289,864 + 15224 mRNA_6856 0.81 0.2
290,024 - 15224 mRNA_6856 0.83 0.1
290,215 - 15224 mRNA_6856 0.86 0.3
290,323 - 15224 mRNA_6856 0.87 -2.5
290,330 + 15224 mRNA_6856 0.87 -0.9
290,424 - 15224 mRNA_6856 0.89 -2.5
290,470 + 15224 mRNA_6856 0.89 0.2
290,667 - -0.9
290,778 + -2.6
290,887 + 0.8
290,909 + -0.1
290,930 + 0.5
290,941 + -0.5
291,056 + 1.7
291,056 - 0.3
291,219 - 0.0
291,225 - -1.4
291,321 - -0.8
291,324 - -0.7
291,325 - 0.6
291,662 + 0.2
291,838 + 0.8
291,975 + -0.7
292,093 + -0.6
292,120 + 0.4