Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6707

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6706: 15074 - K16261 YAT yeast amino acid transporter, at 1497015 to 1499228 15074 mRNA_6707: 15075 - KOG3750 Inositol phospholipid synthesis protein, Scs3p, at 1499428 to 1503895 15075 mRNA_6708: 15076 - KOG3743 Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5), at 1504719 to 1508015 15076

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,498,764 - 15074 mRNA_6706 0.79 1.9
1,499,331 - 0.3
1,499,337 - 0.6
1,499,507 - 0.4
1,499,642 + -0.4
1,499,650 + -2.6
1,500,378 + 15075 mRNA_6707 0.21 0.1
1,500,515 - 15075 mRNA_6707 0.24 -0.7
1,500,521 - 15075 mRNA_6707 0.24 1.1
1,500,522 - 15075 mRNA_6707 0.24 2.1
1,500,526 - 15075 mRNA_6707 0.25 0.0
1,500,531 - 15075 mRNA_6707 0.25 0.1
1,500,537 + 15075 mRNA_6707 0.25 0.4
1,500,542 + 15075 mRNA_6707 0.25 -0.6
1,500,546 + 15075 mRNA_6707 0.25 -2.2
1,500,569 - 15075 mRNA_6707 0.26 1.5
1,500,578 + 15075 mRNA_6707 0.26 0.0
1,500,695 + 15075 mRNA_6707 0.28 0.7
1,500,718 + 15075 mRNA_6707 0.29 -0.6
1,500,835 - 15075 mRNA_6707 0.31 -0.1
1,500,838 + 15075 mRNA_6707 0.32 0.9
1,500,859 - 15075 mRNA_6707 0.32 -1.1
1,500,970 - 15075 mRNA_6707 0.35 0.1
1,501,316 + 15075 mRNA_6707 0.42 -0.8
1,501,563 - 15075 mRNA_6707 0.48 -0.4
1,501,895 + 15075 mRNA_6707 0.55 -0.0
1,502,191 + 15075 mRNA_6707 0.62 -0.8
1,502,277 - 15075 mRNA_6707 0.64 0.5
1,502,473 + 15075 mRNA_6707 0.68 -3.0
1,503,086 - 15075 mRNA_6707 0.82 1.4
1,503,094 - 15075 mRNA_6707 0.82 0.4
1,503,354 + 15075 mRNA_6707 0.88 -1.3
1,503,482 + 1.0
1,503,482 + -0.1
1,503,487 - 1.2
1,503,641 - -0.6
1,503,778 + 0.4
1,503,799 + 0.3
1,503,915 + -1.6
1,503,925 - 0.0
1,503,926 - 0.2
1,503,926 + -0.3
1,503,930 + 0.2
1,503,950 - -1.3
1,504,009 - 1.1
1,504,016 - 0.9
1,504,023 + -1.3
1,504,029 - 0.8
1,504,032 + 0.1
1,504,037 - -0.9
1,504,048 - 0.0
1,504,092 - -0.4
1,504,094 - 0.2
1,504,101 - -0.3
1,504,101 - -0.1
1,504,105 - 0.1
1,504,155 - 0.3
1,504,160 - 0.4
1,504,166 + -0.0
1,504,170 + 0.7
1,504,171 + 0.5
1,504,185 - -1.5
1,504,187 - 0.3
1,504,188 + 0.4
1,504,189 - -0.3
1,504,189 + 0.2
1,504,190 + -0.0
1,504,264 + 0.8
1,504,281 + -0.1
1,504,288 + -0.1
1,504,293 - 0.9
1,504,295 + 0.4
1,504,306 + -0.5
1,504,307 + -0.1
1,504,314 - 0.6
1,504,315 - 0.5
1,504,322 + -0.2
1,504,325 + 0.5
1,504,329 + 0.4
1,504,330 - 0.5
1,504,334 - -0.2
1,504,350 - -0.5
1,504,368 + -0.6
1,504,390 + 1.2
1,504,400 - 0.2
1,504,413 + 0.9
1,504,438 - 0.7
1,504,441 - -0.9
1,504,446 + 1.0
1,504,454 + 1.3
1,504,473 - -0.3
1,504,475 - 0.5
1,504,491 - -0.4
1,504,491 - 1.1
1,504,493 - 0.0
1,504,624 + -0.6
1,504,644 - 1.6