Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6690

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6689: 15057 - Hypothetical Protein, at 1445320 to 1449896 15057 mRNA_6690: 15058 - KOG4776 Uncharacterized conserved protein BCNT, at 1450331 to 1454298 15058 mRNA_6691: 15059 - KOG3010 Methyltransferase, at 1454894 to 1456156 15059

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,449,829 - -1.3
1,449,975 + 0.0
1,450,045 + -0.5
1,451,710 - 15058 mRNA_6690 0.35 0.6
1,451,783 + 15058 mRNA_6690 0.37 -0.1
1,451,902 + 15058 mRNA_6690 0.40 -1.4
1,451,907 + 15058 mRNA_6690 0.40 1.0
1,452,030 - 15058 mRNA_6690 0.43 -1.1
1,452,034 + 15058 mRNA_6690 0.43 -0.0
1,452,037 + 15058 mRNA_6690 0.43 0.8
1,452,172 - 15058 mRNA_6690 0.46 -0.9
1,452,462 - 15058 mRNA_6690 0.54 -0.6
1,452,464 - 15058 mRNA_6690 0.54 0.5
1,452,464 + 15058 mRNA_6690 0.54 -0.4
1,452,580 - 15058 mRNA_6690 0.57 0.1
1,452,595 + 15058 mRNA_6690 0.57 0.9
1,452,723 - 15058 mRNA_6690 0.60 2.4
1,452,747 + 15058 mRNA_6690 0.61 0.1
1,452,749 - 15058 mRNA_6690 0.61 -1.2
1,452,756 - 15058 mRNA_6690 0.61 0.6
1,452,758 - 15058 mRNA_6690 0.61 -0.6
1,452,765 - 15058 mRNA_6690 0.61 0.0
1,452,785 - 15058 mRNA_6690 0.62 0.2
1,452,797 + 15058 mRNA_6690 0.62 0.3
1,452,811 - 15058 mRNA_6690 0.62 1.1
1,452,852 + 15058 mRNA_6690 0.64 0.1
1,452,864 + 15058 mRNA_6690 0.64 0.6
1,452,878 + 15058 mRNA_6690 0.64 0.3
1,452,878 + 15058 mRNA_6690 0.64 0.7
1,452,879 - 15058 mRNA_6690 0.64 -0.5
1,452,887 - 15058 mRNA_6690 0.64 -0.4
1,452,888 - 15058 mRNA_6690 0.64 -0.6
1,452,889 + 15058 mRNA_6690 0.64 -2.0
1,452,889 + 15058 mRNA_6690 0.64 -2.2
1,452,892 - 15058 mRNA_6690 0.65 -0.1
1,452,896 - 15058 mRNA_6690 0.65 -0.1
1,452,896 - 15058 mRNA_6690 0.65 1.1
1,452,899 + 15058 mRNA_6690 0.65 1.2
1,452,900 + 15058 mRNA_6690 0.65 0.8
1,452,907 - 15058 mRNA_6690 0.65 -3.5
1,452,907 - 15058 mRNA_6690 0.65 0.2
1,452,908 - 15058 mRNA_6690 0.65 -0.4
1,452,909 - 15058 mRNA_6690 0.65 -0.3
1,452,910 - 15058 mRNA_6690 0.65 0.3
1,452,911 - 15058 mRNA_6690 0.65 0.3
1,452,913 - 15058 mRNA_6690 0.65 -0.6
1,452,913 + 15058 mRNA_6690 0.65 0.2
1,452,915 + 15058 mRNA_6690 0.65 -0.7
1,452,915 - 15058 mRNA_6690 0.65 2.1
1,452,917 + 15058 mRNA_6690 0.65 -0.4
1,452,918 + 15058 mRNA_6690 0.65 0.4
1,452,922 + 15058 mRNA_6690 0.65 0.3
1,452,926 - 15058 mRNA_6690 0.65 -0.2
1,452,926 + 15058 mRNA_6690 0.65 -0.0
1,452,926 + 15058 mRNA_6690 0.65 0.7
1,452,927 + 15058 mRNA_6690 0.65 -0.2
1,452,931 - 15058 mRNA_6690 0.66 0.6
1,452,933 + 15058 mRNA_6690 0.66 -0.4
1,452,934 + 15058 mRNA_6690 0.66 -0.0
1,452,934 + 15058 mRNA_6690 0.66 -1.8
1,452,988 + 15058 mRNA_6690 0.67 1.5
1,452,996 - 15058 mRNA_6690 0.67 -0.1
1,452,997 - 15058 mRNA_6690 0.67 1.4
1,452,998 - 15058 mRNA_6690 0.67 1.3
1,452,998 - 15058 mRNA_6690 0.67 -0.5
1,452,999 + 15058 mRNA_6690 0.67 0.7
1,452,999 + 15058 mRNA_6690 0.67 -2.1
1,453,001 - 15058 mRNA_6690 0.67 0.1
1,453,004 - 15058 mRNA_6690 0.67 0.4
1,453,009 + 15058 mRNA_6690 0.67 0.2
1,453,014 + 15058 mRNA_6690 0.68 0.2
1,453,023 + 15058 mRNA_6690 0.68 0.1
1,453,025 + 15058 mRNA_6690 0.68 -1.8
1,453,026 - 15058 mRNA_6690 0.68 0.5
1,453,026 - 15058 mRNA_6690 0.68 -0.7
1,453,040 - 15058 mRNA_6690 0.68 -1.0
1,453,050 - 15058 mRNA_6690 0.69 -1.4
1,453,059 - 15058 mRNA_6690 0.69 2.5
1,453,087 - 15058 mRNA_6690 0.69 0.8
1,453,142 - 15058 mRNA_6690 0.71 0.3
1,453,171 - 15058 mRNA_6690 0.72 0.6
1,453,184 - 15058 mRNA_6690 0.72 0.7
1,453,187 + 15058 mRNA_6690 0.72 0.2
1,453,187 + 15058 mRNA_6690 0.72 -0.4
1,453,188 + 15058 mRNA_6690 0.72 -0.5
1,453,190 - 15058 mRNA_6690 0.72 0.3
1,453,191 - 15058 mRNA_6690 0.72 0.6
1,453,200 - 15058 mRNA_6690 0.72 0.1
1,453,200 + 15058 mRNA_6690 0.72 0.4
1,453,201 - 15058 mRNA_6690 0.72 -0.7
1,453,207 - 15058 mRNA_6690 0.72 0.4
1,453,208 - 15058 mRNA_6690 0.73 0.6
1,453,214 - 15058 mRNA_6690 0.73 -0.5
1,453,223 + 15058 mRNA_6690 0.73 1.9
1,453,228 - 15058 mRNA_6690 0.73 -1.1
1,453,230 - 15058 mRNA_6690 0.73 -3.9
1,453,230 + 15058 mRNA_6690 0.73 0.4
1,453,236 + 15058 mRNA_6690 0.73 0.5
1,453,239 + 15058 mRNA_6690 0.73 1.1
1,453,255 + 15058 mRNA_6690 0.74 -1.8
1,453,292 + 15058 mRNA_6690 0.75 1.3
1,453,299 + 15058 mRNA_6690 0.75 0.8
1,453,445 - 15058 mRNA_6690 0.78 0.9
1,453,465 - 15058 mRNA_6690 0.79 0.2
1,453,483 + 15058 mRNA_6690 0.79 -1.1
1,453,491 + 15058 mRNA_6690 0.80 0.2
1,453,503 + 15058 mRNA_6690 0.80 -0.6
1,453,649 + 15058 mRNA_6690 0.84 0.8
1,453,678 + 15058 mRNA_6690 0.84 0.2
1,454,081 - 0.8
1,454,184 + 0.4
1,454,807 - -0.1
1,454,933 + -1.5
1,455,147 + 15059 mRNA_6691 0.20 -0.5
1,455,157 - 15059 mRNA_6691 0.21 0.4