Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6675

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6674: 15042 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 1418030 to 1419199 15042 mRNA_6675: 15043 - Hypothetical Protein, at 1419227 to 1419845 15043 mRNA_6676: 15044 - KOG3138 Predicted N-acetyltransferase, at 1419972 to 1420806 15044

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,418,340 - 15042 mRNA_6674 0.26 0.5
1,418,464 - 15042 mRNA_6674 0.37 -1.5
1,418,492 - 15042 mRNA_6674 0.39 -0.0
1,418,643 + 15042 mRNA_6674 0.52 -2.2
1,418,769 + 15042 mRNA_6674 0.63 -0.3
1,418,936 - 15042 mRNA_6674 0.77 0.6
1,419,219 + 0.6
1,419,340 - 15043 mRNA_6675 0.18 0.5
1,419,488 - 15043 mRNA_6675 0.42 1.3
1,419,507 + 15043 mRNA_6675 0.45 -1.1
1,419,527 - 15043 mRNA_6675 0.48 0.1
1,419,628 + 15043 mRNA_6675 0.65 0.1
1,419,629 + 15043 mRNA_6675 0.65 0.9
1,419,636 + 15043 mRNA_6675 0.66 -0.2
1,419,646 + 15043 mRNA_6675 0.68 -1.7
1,419,647 + 15043 mRNA_6675 0.68 -0.2
1,419,648 + 15043 mRNA_6675 0.68 0.0
1,419,654 - 15043 mRNA_6675 0.69 0.2
1,419,659 + 15043 mRNA_6675 0.70 0.7
1,419,670 + 15043 mRNA_6675 0.72 0.5
1,419,778 - 15043 mRNA_6675 0.89 0.2
1,419,780 + 15043 mRNA_6675 0.89 -2.3
1,419,811 + -0.7
1,419,811 + 0.5
1,419,827 - -0.9
1,419,880 + -0.4
1,419,938 - 1.3
1,419,950 - 1.1
1,419,975 - 0.4
1,419,976 + -0.6
1,419,991 - 0.3
1,420,118 + 15044 mRNA_6676 0.17 -0.9
1,420,122 + 15044 mRNA_6676 0.18 -0.0
1,420,699 + 15044 mRNA_6676 0.87 -3.0
1,420,750 - -0.5
1,420,760 - 0.6
1,420,809 - -0.0
1,420,813 + -0.6