Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6660

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6659: 15027 - K05663 ABC.ATM mitochondrial ABC transporter ATM, at 1370693 to 1373174 15027 mRNA_6660: 15028 - KOG1342 Histone deacetylase complex, catalytic component RPD3, at 1373866 to 1375485 15028 mRNA_6661: 15029 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 1375555 to 1377901 15029

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,373,375 - -3.7
1,373,648 - -2.5
1,373,660 - -1.2
1,373,819 + -1.9
1,373,837 - 0.5
1,373,838 + 0.8
1,373,854 + -0.2
1,373,927 + -1.1
1,373,951 - -0.5
1,373,959 - 0.6
1,373,987 - 0.9
1,373,993 + -1.0
1,373,993 + 0.5
1,374,227 + 15028 mRNA_6660 0.22 -0.6
1,374,272 + 15028 mRNA_6660 0.25 1.2
1,374,289 + 15028 mRNA_6660 0.26 0.0
1,374,303 - 15028 mRNA_6660 0.27 0.4
1,374,432 + 15028 mRNA_6660 0.35 0.6
1,374,701 - 15028 mRNA_6660 0.52 -0.6
1,374,859 - 15028 mRNA_6660 0.61 1.0
1,375,106 - 15028 mRNA_6660 0.77 0.2
1,375,194 - 15028 mRNA_6660 0.82 0.7
1,375,517 + 1.1
1,376,168 - 15029 mRNA_6661 0.26 0.5
1,376,291 + 15029 mRNA_6661 0.31 -0.3
1,376,452 + 15029 mRNA_6661 0.38 1.3