Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6543

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6542: 14910 - BLAST WSC domain containing protein [Zymoseptoria brevis], at 1036712 to 1039171 14910 mRNA_6543: 14911 - K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2, at 1039593 to 1046261 14911 mRNA_6544: 14912 - K02138 ATPeF0D, ATP5H, ATP7 F-type H+-transporting ATPase subunit d, at 1046957 to 1048093 14912

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,038,671 - 14910 mRNA_6542 0.80 -1.3
1,038,678 - 14910 mRNA_6542 0.80 0.5
1,038,679 - 14910 mRNA_6542 0.80 -0.5
1,038,697 + 14910 mRNA_6542 0.81 -0.0
1,038,705 + 14910 mRNA_6542 0.81 -0.4
1,038,974 + 0.8
1,038,985 - 2.6
1,038,988 + -0.1
1,038,993 + 0.4
1,039,127 - 1.0
1,039,138 + -1.2
1,039,143 + 0.9
1,039,271 - -0.9
1,039,276 - 0.6
1,039,277 - -1.3
1,039,278 - 0.2
1,039,278 - -1.8
1,039,287 - -0.6
1,039,290 - 0.8
1,039,309 - -1.2
1,039,361 + 0.3
1,039,388 + 1.2
1,039,427 - -1.1
1,039,437 - 0.2
1,039,443 - 0.1
1,039,448 - 0.7
1,040,016 - 0.2
1,040,938 + 14911 mRNA_6543 0.20 1.2
1,041,033 - 14911 mRNA_6543 0.22 0.4
1,041,193 - 14911 mRNA_6543 0.24 -3.1
1,041,909 + 14911 mRNA_6543 0.35 -0.1
1,041,994 + 14911 mRNA_6543 0.36 -0.7
1,042,062 - 14911 mRNA_6543 0.37 0.8
1,042,194 - 14911 mRNA_6543 0.39 0.6
1,042,783 + 14911 mRNA_6543 0.48 0.6
1,043,056 - 14911 mRNA_6543 0.52 -0.9
1,043,225 - 14911 mRNA_6543 0.54 0.9
1,043,657 + 14911 mRNA_6543 0.61 0.5
1,043,919 - 14911 mRNA_6543 0.65 -1.9
1,044,565 + 14911 mRNA_6543 0.75 0.5
1,044,946 - 14911 mRNA_6543 0.80 0.4
1,045,059 - 14911 mRNA_6543 0.82 1.0
1,045,266 - 14911 mRNA_6543 0.85 -0.4
1,045,554 + 14911 mRNA_6543 0.89 1.7
1,045,812 + -0.0
1,045,837 + -0.5
1,045,840 + 0.2
1,045,843 - 0.1
1,045,977 - 0.1
1,045,983 + 0.4
1,045,986 - 1.6
1,046,104 - 0.1
1,046,109 - -1.2
1,046,109 - -1.7
1,046,112 + -0.5
1,046,116 + -1.0
1,046,122 - 1.0
1,046,140 - 1.0
1,046,140 - -0.0
1,046,142 - 0.3
1,046,142 + 0.2
1,046,143 + 0.1
1,046,144 + 0.7
1,046,145 - 0.1
1,046,147 + 1.2
1,046,147 + 0.1
1,046,147 + -0.1
1,046,148 + 1.3
1,046,148 - -0.3
1,046,148 - 1.6
1,046,150 + 1.6
1,046,150 + -1.3
1,046,153 - 0.2
1,046,158 + -0.5
1,046,158 + 0.1
1,046,159 - -0.7
1,046,159 - 0.5
1,046,159 + 0.3
1,046,160 + -0.5
1,046,160 - 0.5
1,046,162 + -0.6
1,046,163 + 1.5
1,046,166 + -2.4
1,046,169 + 0.2
1,046,173 - -0.1
1,046,189 + 0.8
1,046,198 - 0.4
1,046,199 - 1.1
1,046,206 - -0.2
1,046,206 + -1.0
1,046,212 + 0.4
1,046,232 + -0.3
1,046,245 - 0.5
1,046,251 - 1.5
1,046,252 + -0.2
1,046,257 + 0.2
1,046,270 + -1.4
1,046,272 + 0.3
1,046,277 - -0.3
1,046,278 - 0.1
1,046,285 + 1.1
1,046,289 - 1.1
1,046,290 - 1.6
1,046,291 + 0.5
1,046,299 - 1.2
1,046,307 + -1.0
1,046,308 - 0.2
1,046,315 + -0.8
1,046,328 + 0.1
1,046,332 + -2.2
1,046,348 - -1.5
1,046,355 - -0.2
1,046,362 + -3.9
1,046,362 - -2.0
1,046,367 - 0.5
1,046,373 - -0.4
1,046,378 + -0.2
1,046,380 + 0.5
1,046,386 + 0.8
1,046,387 - -1.2
1,046,387 - 0.1
1,046,389 + -1.7
1,046,408 + 0.4
1,046,411 + -0.1
1,046,420 - 0.5
1,046,420 + 0.6
1,046,421 - 0.6
1,046,426 - -1.9
1,046,428 + 0.0
1,046,432 + 0.3
1,046,433 - -0.1
1,046,443 - 1.3
1,046,448 - 0.3
1,046,463 - -1.2
1,046,470 + -0.9
1,046,479 - -1.0
1,046,483 - -1.2
1,046,486 + 0.4
1,046,490 + 0.5
1,046,494 + 0.2
1,046,497 - -0.6
1,046,508 - 0.4
1,046,523 + -2.8
1,046,524 - -0.4
1,046,542 + -0.1
1,046,557 - -0.1
1,046,576 + -0.7
1,046,577 - 1.3
1,046,580 + 0.9
1,046,591 - 0.4
1,046,638 - 1.0
1,046,657 + -1.3
1,046,785 + -1.5
1,046,811 + -0.3