Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6399

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6398: 14766 - K14556 DIP2, UTP12, WDR3 U3 small nucleolar RNA-associated protein 12, at 720765 to 724339 14766 mRNA_6399: 14767 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 724341 to 725780 14767 mRNA_6400: 14768 - K15720 N4BP2 NEDD4-binding protein 2, at 726204 to 728180 14768

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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724,204 + 0.0
724,382 - -0.4
724,562 + 14767 mRNA_6399 0.15 -0.8
724,786 - 14767 mRNA_6399 0.31 0.7
724,939 + 14767 mRNA_6399 0.42 -0.2
724,946 + 14767 mRNA_6399 0.42 -0.6
725,096 - 14767 mRNA_6399 0.52 -0.9
725,102 + 14767 mRNA_6399 0.53 0.1
725,375 + 14767 mRNA_6399 0.72 1.3
725,812 - 0.2
725,814 - 0.4
725,824 + -0.0
725,830 + -2.1
725,835 - 0.4
725,839 - 0.0
725,978 - 0.6
725,980 - 1.1
726,005 - 0.7
726,013 + -0.6
726,068 - 1.0
726,069 - 0.2
726,095 + -0.4
726,232 - -0.0
726,244 + -0.4
726,386 + -0.1
726,397 + 0.6
726,706 + 14768 mRNA_6400 0.25 0.9