Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6291

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451269 to 452760 14658 mRNA_6291: 14659 - K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate, at 453109 to 455308 14659 mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455485 to 457859 14660

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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452,250 - 14658 mRNA_6290 0.66 0.5
452,523 + 14658 mRNA_6290 0.84 -0.1
452,578 - 14658 mRNA_6290 0.88 0.3
452,690 - 1.3
452,716 + 1.7
452,841 - -0.0
452,842 - -1.4
452,861 + -0.3
453,036 + -1.1
453,178 - -1.0
453,191 - -3.3
453,217 + -1.5
453,466 + 14659 mRNA_6291 0.16 -0.4
453,608 + 14659 mRNA_6291 0.23 -4.1
454,334 + 14659 mRNA_6291 0.56 -2.9
454,784 + 14659 mRNA_6291 0.76 0.0
455,067 + 14659 mRNA_6291 0.89 -2.9
455,096 + -0.6
455,184 - -1.3
455,207 - -1.4
455,210 + -2.4
455,213 + -0.5
455,227 + -3.2
455,337 - -0.2
455,400 - -0.4
455,453 + 0.4
455,457 - -1.0
455,459 - -1.0
455,466 + -0.3
455,473 - 0.7
455,571 + -3.3
455,582 - -0.9
455,591 + -2.8
455,591 - 0.4
455,608 - 0.1
455,743 + 14660 mRNA_6292 0.11 -0.4
455,769 - 14660 mRNA_6292 0.12 -0.2
455,895 - 14660 mRNA_6292 0.17 0.4
456,063 - 14660 mRNA_6292 0.24 0.2