Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6215

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6214: 14582 - K11684 BDF1 bromodomain-containing factor 1, at 268724 to 272351 14582 mRNA_6215: 14583 - Hypothetical Protein, at 272624 to 273109 14583 mRNA_6216: 14584 - K03120 TBP, tbp transcription initiation factor TFIID TATA-box-binding protein, at 274096 to 275401 14584

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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272,476 - -0.4
272,479 + -1.7
272,479 + -1.4
272,486 - 0.6
272,486 + -0.9
272,489 - 0.8
272,492 + -1.1
272,508 - 0.4
272,531 + 0.3
272,565 - 1.6
272,565 - 1.0
272,567 - -0.5
272,571 + 0.8
272,574 + 0.6
272,591 + -0.1
272,598 - 0.6
272,670 - 1.5
272,713 - 14583 mRNA_6215 0.18 0.0
272,730 + 14583 mRNA_6215 0.22 2.1
272,733 + 14583 mRNA_6215 0.22 0.2
272,741 + 14583 mRNA_6215 0.24 -0.3
272,998 - 14583 mRNA_6215 0.77 1.1
273,159 - -0.4
273,296 + -1.0