Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6182

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192986 to 195356 14549 mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196153 to 199901 14550 mRNA_6183: 14551 - Hypothetical Protein, at 200560 to 201520 14551

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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195,417 + 0.6
195,565 - -5.5
195,600 - -1.2
195,624 + 0.6
195,736 - -1.9
195,738 + 0.7
195,742 + -0.8
195,744 + -0.5
195,746 + 0.1
195,756 + 0.2
195,757 - 0.0
195,757 + 0.3
195,768 - -0.5
195,773 + -1.1
195,780 + -0.4
195,908 - 1.6
196,044 - -0.1
196,055 - -0.4
196,056 + -0.3
196,113 + 0.5
196,151 + 0.6
196,498 + -2.8
196,613 + 14550 mRNA_6182 0.12 -0.6
196,805 - 14550 mRNA_6182 0.17 -0.8
196,985 + 14550 mRNA_6182 0.22 -2.7
197,099 + 14550 mRNA_6182 0.25 1.6
197,495 - 14550 mRNA_6182 0.36 -0.6
197,639 - 14550 mRNA_6182 0.40 0.1
197,827 - 14550 mRNA_6182 0.45 -3.0
198,001 + 14550 mRNA_6182 0.49 -0.7
198,138 + 14550 mRNA_6182 0.53 -1.4
198,293 - 14550 mRNA_6182 0.57 -2.2
198,400 - 14550 mRNA_6182 0.60 0.4
198,426 + 14550 mRNA_6182 0.61 0.8
198,658 - 14550 mRNA_6182 0.67 -0.6
198,799 - 14550 mRNA_6182 0.71 -2.6
199,673 + -1.1
199,684 + -4.6
199,806 - -0.9
199,819 - -2.0
199,820 - -3.0
199,856 + -1.8
199,937 - -0.5
199,956 + -1.6
199,971 + 0.4
199,987 + -4.5
199,998 + -0.3
200,004 + -0.5
200,104 - 0.9
200,110 - 1.0
200,115 - 0.6
200,119 - -1.6
200,121 - -0.1
200,121 - 0.4
200,122 + 0.5
200,131 - 1.2
200,139 + -0.7
200,140 - 0.1
200,141 + -0.5
200,147 - 0.6
200,151 + -0.6
200,164 + -0.7
200,171 - -0.2
200,245 + 1.4
200,249 - 0.9
200,259 - 0.2
200,266 - 1.8
200,267 + 2.8
200,269 - -0.4
200,272 - 0.6
200,274 - -1.8
200,274 + -0.8
200,276 - 0.5
200,276 - 0.4
200,279 + -1.2
200,281 + -0.7
200,290 + -0.7
200,292 - 1.8
200,292 + 0.6
200,294 - 0.6
200,294 + 0.3
200,294 + 2.5
200,296 + 0.5
200,298 + 0.6
200,301 + 0.6
200,304 + 1.2
200,307 + 1.4
200,310 + 0.9
200,315 + 0.8
200,318 + 0.1
200,340 + 0.0
200,342 + -0.0
200,377 + -0.0
200,389 - 0.1
200,390 + 1.0
200,393 - -1.3
200,403 - 0.8
200,406 + -1.3
200,415 + -0.9
200,498 - -0.4
200,549 + 0.2
200,555 + -1.3
200,558 - 0.1
200,560 - -0.1
200,563 - 0.4
200,570 - 1.2
200,574 - 0.1
200,574 - -0.6
200,589 + -0.6
200,590 - -0.9
200,598 + 0.7
200,599 - 0.7
200,601 + 2.0
200,602 - -0.7
200,602 + 1.0
200,603 - -0.5
200,603 - -0.5
200,604 - -1.7
200,609 - 0.7
200,616 - 0.4
200,619 + 2.1
200,622 + -0.2
200,626 - -0.6
200,629 + 0.7
200,632 + 0.0
200,633 + -0.9
200,634 - 1.3
200,638 + -1.3
200,639 + 0.7
200,641 - 0.5
200,643 + 0.5
200,643 + 0.4
200,644 + 0.1
200,652 + -0.5
200,737 + 14551 mRNA_6183 0.18 0.6
200,755 - 14551 mRNA_6183 0.20 -1.9
200,757 + 14551 mRNA_6183 0.20 -0.3
200,760 - 14551 mRNA_6183 0.21 -0.3
200,761 + 14551 mRNA_6183 0.21 -0.3
200,761 + 14551 mRNA_6183 0.21 0.2
200,772 + 14551 mRNA_6183 0.22 0.1
200,781 + 14551 mRNA_6183 0.23 -0.0
200,781 - 14551 mRNA_6183 0.23 1.8
200,786 - 14551 mRNA_6183 0.24 -0.3
200,788 + 14551 mRNA_6183 0.24 -1.5
200,798 - 14551 mRNA_6183 0.25 1.4
200,799 - 14551 mRNA_6183 0.25 0.9
200,799 + 14551 mRNA_6183 0.25 1.1
200,800 + 14551 mRNA_6183 0.25 1.7
200,804 - 14551 mRNA_6183 0.25 0.4
200,832 + 14551 mRNA_6183 0.28 -0.0