Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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39 + 0.6
39 + -1.2
40 + 1.1
40 + -0.3
40 + -0.5
41 + 0.8
56 + 0.8
56 + 0.2
56 + 0.2
58 + 1.9
59 + 1.5
59 + -3.6
62 - 1.5
65 - -0.1
77 + -0.2
84 + 0.2
102 + -1.6
137 + -0.7
151 + 0.1
200 + -0.3
208 + 0.3
216 + -0.3
229 + -1.2
348 - -0.8
430 + 0.7
498 - -0.5
502 - -1.1
685 + 14474 mRNA_6106 0.13 -0.3
747 + 14474 mRNA_6106 0.15 -0.4
755 + 14474 mRNA_6106 0.15 -1.4
946 + 14474 mRNA_6106 0.21 -1.2
975 + 14474 mRNA_6106 0.22 -2.2
1,245 + 14474 mRNA_6106 0.30 0.4
2,125 + 14474 mRNA_6106 0.55 -0.6
2,839 - 14474 mRNA_6106 0.76 -0.1
3,125 - 14474 mRNA_6106 0.84 -0.9
3,248 - 14474 mRNA_6106 0.88 -2.7
3,570 + -2.6
3,665 + -1.7
3,692 + 0.2
3,706 + -3.3
3,726 + 0.7
3,820 + -0.5
3,853 + -0.2
3,859 + -0.1
3,909 - -0.0
3,929 - -2.2