Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5573

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405680 to 409565 13940 mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409933 to 411114 13941

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
409,527 + -0.2
409,575 - -2.6
409,590 + -0.2
409,598 - 0.2
409,614 + 0.2
409,614 + 0.4
409,617 - 0.9
409,624 + 1.2
409,670 - -0.6
409,696 - -1.5
409,717 - -0.2
409,730 + -0.2
409,755 - -1.9
409,834 - 0.7
409,863 - -1.3
409,939 + 1.3
410,023 + 0.4
410,040 + 0.2
410,115 + 13941 mRNA_5573 0.15 -0.5
410,306 + 13941 mRNA_5573 0.32 -0.2
410,323 + 13941 mRNA_5573 0.33 -0.8
410,562 + 13941 mRNA_5573 0.53 -0.7
410,580 + 13941 mRNA_5573 0.55 0.3
410,769 + 13941 mRNA_5573 0.71 -1.4
410,799 + 13941 mRNA_5573 0.73 -0.7
410,808 + 13941 mRNA_5573 0.74 1.7
410,828 - 13941 mRNA_5573 0.76 0.7
410,852 - 13941 mRNA_5573 0.78 -0.4
410,865 + 13941 mRNA_5573 0.79 -0.1
410,988 + 13941 mRNA_5573 0.89 -0.9
411,001 - -0.4
411,007 + -0.4
411,010 + 0.1
411,036 + 1.1
411,059 - -0.1
411,130 - -1.6
411,136 + 1.1
411,149 - -0.4
411,173 - -0.1
411,180 + -0.2
411,185 + -1.8
411,198 + -0.7
411,198 + -0.1
411,220 - -1.0
411,264 - 1.1
411,269 + 0.6
411,271 + 3.0
411,282 + -0.2
411,288 - 0.6
411,293 + -0.5
411,296 - -0.2
411,307 + 0.6
411,310 - -0.2
411,311 - 0.5
411,312 + -0.0
411,315 + -2.9
411,316 - 0.5
411,317 + -2.2
411,317 + 0.1
411,318 + 0.3
411,319 - 0.3
411,319 + 0.9
411,322 - 0.1
411,328 - -0.1
411,337 - 0.1
411,337 + 0.7
411,338 + 1.0
411,345 - -2.8
411,364 - 1.2
411,368 - -1.5
411,374 - -0.3
411,383 - -1.6
411,388 - 1.0
411,395 + -0.1
411,412 + -1.2
411,416 + -2.3
411,424 - 0.8
411,427 - -0.7
411,433 + -1.0
411,438 - 0.5
411,449 - 1.2
411,453 + -0.5
411,455 - -1.8
411,458 - -0.7
411,465 - 1.0
411,466 - 0.6
411,475 + 0.6
411,482 + 0.7
411,489 - 0.6
411,496 - -0.4
411,503 + 0.1
411,504 - -1.6
411,524 - -0.2
411,531 + -1.1
411,541 - 0.3
411,555 - 0.3
411,569 + 0.3
411,570 - -0.6
411,588 - 0.1
411,600 - 0.9
411,619 + 0.7
411,621 - 0.9
411,646 - 0.7
411,651 - -0.2
411,652 - -0.5
411,652 - -0.1
411,657 + 0.8
411,659 + 1.7
411,659 - -2.7
411,661 - -1.0
411,662 - -1.6
411,663 - 0.2
411,663 - 0.6
411,663 + 1.2
411,666 + 0.4
411,672 + 0.2
411,679 + 0.0
411,683 - 0.1
411,684 + 1.0
411,685 + -0.1
411,685 + -0.2
411,685 - -0.3
411,687 - 0.6
411,690 + 0.4
411,692 + 0.2
411,693 + 0.6
411,697 - -0.3
411,702 + 0.5
411,702 - -0.2
411,703 + -1.1
411,707 + -0.0
411,707 + -0.2
411,711 + -0.6
411,715 + -0.2
411,716 + -1.7
411,723 + 0.4
411,727 - 1.4
411,727 + -0.9
411,729 - 0.6
411,742 - 0.5
411,746 - -0.4
411,751 - 1.5
411,754 - -3.7
411,755 + 1.5
411,756 + -1.3
411,761 + 0.1
411,765 - -0.1
411,773 - 1.4
411,774 + 0.8
411,774 + 0.5
411,775 + -0.7
411,775 + -0.8
411,776 + -0.5
411,776 - -0.7
411,781 - -0.4
411,784 + -1.9
411,785 - 0.6
411,788 - -0.3
411,789 - 0.6
411,795 + -0.4
411,795 - 0.8
411,799 + -0.0
411,799 + 0.6
411,801 - -0.6
411,802 - 1.5
411,802 - 0.2
411,815 - 0.2
411,822 - -0.1
411,826 + 0.4
411,831 + -0.6
411,876 + 0.6
411,932 - -0.1
411,948 - 1.1
411,955 + -1.2
411,959 - -1.5
411,959 + 0.1
411,979 + 0.6
411,980 + 0.2
411,985 - 0.3
411,987 + 0.0
411,989 + 0.7
412,064 + -1.8
412,097 + 0.2
412,097 - -1.7