Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5395

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763 mRNA_5396: 13764 - KOG4567 GTPase-activating protein, at 2092 to 5786 13764

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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158 - 0.4
159 - -0.2
160 - 0.5
169 - 0.8
180 - 1.1
189 + -0.5
198 + -0.5
201 - -1.4
208 - -0.1
210 + -1.5
225 + 13762 mRNA_5394 0.11 0.6
225 + 13762 mRNA_5394 0.11 0.4
244 + 13762 mRNA_5394 0.13 -0.0
245 - 13762 mRNA_5394 0.13 1.3
271 - 13762 mRNA_5394 0.16 -0.6
276 - 13762 mRNA_5394 0.16 -2.5
277 + 13762 mRNA_5394 0.16 1.1
280 - 13762 mRNA_5394 0.17 -0.8
306 + 13762 mRNA_5394 0.19 0.7
317 - 13762 mRNA_5394 0.21 -1.1
345 + 13762 mRNA_5394 0.23 -1.9
345 - 13762 mRNA_5394 0.23 -3.1
347 + 13762 mRNA_5394 0.24 0.6
359 - 13762 mRNA_5394 0.25 -0.4
387 - 13762 mRNA_5394 0.28 -0.4
399 + 13762 mRNA_5394 0.29 0.6
434 + 13762 mRNA_5394 0.33 0.8
447 - 13762 mRNA_5394 0.34 0.1
485 - 13762 mRNA_5394 0.38 -2.5
543 + 13762 mRNA_5394 0.44 -1.5
649 + 13762 mRNA_5394 0.55 -0.7
667 + 13762 mRNA_5394 0.57 -3.3
667 - 13762 mRNA_5394 0.57 0.4
678 - 13762 mRNA_5394 0.58 0.5
718 + 13762 mRNA_5394 0.63 -1.2
723 + 13762 mRNA_5394 0.63 -1.1
802 + 13762 mRNA_5394 0.71 0.6
806 + 13762 mRNA_5394 0.72 1.8
905 - 13762 mRNA_5394 0.82 0.7
911 + 13762 mRNA_5394 0.83 0.1
965 + 13762 mRNA_5394 0.88 -0.4
966 + 13762 mRNA_5394 0.89 0.4
968 + 13762 mRNA_5394 0.89 0.5
1,014 - 0.2
1,084 - 1.9
1,103 - -0.2
1,110 + -0.6
1,245 - 13763 mRNA_5395 0.11 -1.3
1,260 - 13763 mRNA_5395 0.13 -0.5
1,376 - 13763 mRNA_5395 0.27 -0.4
1,438 + 13763 mRNA_5395 0.34 0.3
1,438 + 13763 mRNA_5395 0.34 0.4
1,438 + 13763 mRNA_5395 0.34 0.2
1,523 + 13763 mRNA_5395 0.44 -1.3
1,528 - 13763 mRNA_5395 0.45 0.5
1,533 + 13763 mRNA_5395 0.45 0.0
1,538 + 13763 mRNA_5395 0.46 -2.2
1,538 - 13763 mRNA_5395 0.46 0.8
1,556 + 13763 mRNA_5395 0.48 -1.3
1,639 + 13763 mRNA_5395 0.58 0.1
1,854 - 13763 mRNA_5395 0.83 0.5
1,855 - 13763 mRNA_5395 0.83 -0.8
1,887 - 13763 mRNA_5395 0.87 -1.6
1,908 - 13763 mRNA_5395 0.89 -0.1
2,000 - -0.7
2,009 + 0.9
2,093 + -0.9
2,125 - -0.2
2,156 - 0.9
2,162 + -1.8
2,397 + 0.2
2,412 + 0.3
2,570 + 13764 mRNA_5396 0.13 -0.7
2,586 + 13764 mRNA_5396 0.13 0.9
2,594 - 13764 mRNA_5396 0.14 -0.1
2,597 + 13764 mRNA_5396 0.14 -1.3
2,661 + 13764 mRNA_5396 0.15 0.6
2,773 + 13764 mRNA_5396 0.18 -0.2
2,847 - 13764 mRNA_5396 0.20 0.2
2,895 - 13764 mRNA_5396 0.22 0.1
2,923 + 13764 mRNA_5396 0.22 -0.3