Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5213

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5212: 13580 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 159635 to 162568 13580 mRNA_5213: 13581 - Hypothetical Protein, at 163193 to 164200 13581 mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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162,534 - -0.2
162,659 + -0.1
162,665 - -0.6
162,667 + -2.2
162,673 - -1.3
162,673 + 0.8
162,673 + -0.9
162,684 - 0.4
162,686 + -0.3
162,688 + -3.1
162,690 - 0.6
162,709 - -0.1
162,712 + -2.1
162,713 - -0.0
162,713 - 0.9
162,713 + -0.7
162,716 + -0.0
162,718 + 0.3
162,720 + -1.9
162,742 - 0.7
162,748 + -1.3
162,761 - 2.3
162,779 - 1.3
162,782 - -2.5
162,792 - 0.3
162,806 - 0.2
162,807 - -0.5
162,822 + -2.3
162,835 - -0.2
162,863 + -0.2
162,879 + 1.0
162,981 + -1.1
163,070 - -0.2
163,385 + 13581 mRNA_5213 0.19 0.1
163,453 - 13581 mRNA_5213 0.26 -0.7
163,668 + 13581 mRNA_5213 0.47 0.6
163,734 + 13581 mRNA_5213 0.54 -0.4
163,948 + 13581 mRNA_5213 0.75 0.8
163,995 + 13581 mRNA_5213 0.80 -1.2
164,058 + 13581 mRNA_5213 0.86 -1.5
164,492 - -0.3
164,788 + 13582 mRNA_5214 0.19 0.2
164,857 - 13582 mRNA_5214 0.22 -0.1
164,941 - 13582 mRNA_5214 0.26 -1.5
164,967 - 13582 mRNA_5214 0.28 0.0
164,995 + 13582 mRNA_5214 0.29 1.5