Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5013

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5012: 13380 - K01886 QARS, glnS glutaminyl-tRNA synthetase, at 1542746 to 1545688 13380 mRNA_5013: 13381 - BLAST regulatory protein wetA [Paracoccidioides lutzii ..., at 1545921 to 1548060 13381

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,545,370 - 13380 mRNA_5012 0.89 -1.7
1,545,682 + -0.7
1,546,444 + 13381 mRNA_5013 0.24 0.9
1,546,547 + 13381 mRNA_5013 0.29 -2.5
1,546,547 - 13381 mRNA_5013 0.29 -0.0
1,546,567 - 13381 mRNA_5013 0.30 0.1
1,547,000 - 13381 mRNA_5013 0.50 0.3
1,547,024 + 13381 mRNA_5013 0.52 1.0
1,547,167 - 13381 mRNA_5013 0.58 -1.3
1,547,308 - 13381 mRNA_5013 0.65 0.3
1,547,357 - 13381 mRNA_5013 0.67 -0.1
1,547,439 + 13381 mRNA_5013 0.71 0.8
1,547,579 - 13381 mRNA_5013 0.77 -2.3
1,547,614 - 13381 mRNA_5013 0.79 0.2
1,547,770 - 13381 mRNA_5013 0.86 1.4
1,547,780 - 13381 mRNA_5013 0.87 1.2
1,547,786 + 13381 mRNA_5013 0.87 -1.4
1,547,906 - 1.1
1,547,915 - 0.5
1,547,917 - 0.4
1,547,933 - -0.9
1,547,952 + -0.6
1,547,976 + -0.3
1,547,980 + 0.4
1,547,981 - 0.8
1,547,982 - 0.8
1,548,002 + 0.4
1,548,029 - -1.1
1,548,036 + -0.2
1,548,037 - 0.3
1,548,042 + -1.5
1,548,044 - 0.6
1,548,053 + -1.1
1,548,057 + 0.2
1,548,059 + -0.7
1,548,060 + 0.9
1,548,063 + -0.2
1,548,069 - -2.1
1,548,069 + -2.2
1,548,077 - -0.6
1,548,082 - 2.7
1,548,097 - -0.4
1,548,119 - 0.2
1,548,120 + 0.0
1,548,125 - -0.7
1,548,132 + -0.1
1,548,132 + -0.6
1,548,134 + 0.5
1,548,134 + 1.1
1,548,135 - 0.4
1,548,157 - 0.3
1,548,160 - -2.3
1,548,171 - 1.4
1,548,172 - 0.2
1,548,181 - 1.3
1,548,193 + -0.4
1,548,195 - 0.1
1,548,201 - 0.4
1,548,208 + 0.6
1,548,212 - -0.6
1,548,212 + -0.0
1,548,218 - 0.2
1,548,220 - 0.9
1,548,241 - 0.2
1,548,271 + 0.1
1,548,279 + 1.1
1,548,297 - -1.0
1,548,299 - -1.2
1,548,302 + -0.2
1,548,305 - -1.5
1,548,311 - -2.1
1,548,311 - -1.5
1,548,342 + 0.5
1,548,346 - 1.1
1,548,355 - 0.1
1,548,361 + -1.0
1,548,362 + 0.9
1,548,363 - 1.2
1,548,365 + 0.3
1,548,369 - 0.1
1,548,375 + -0.5
1,548,380 - -0.1
1,548,385 - -0.4
1,548,385 - 1.1
1,548,397 - -0.2
1,548,398 - 0.9
1,548,403 + 1.1
1,548,404 - -1.3
1,548,411 + -1.1
1,548,412 - 1.9
1,548,416 + 0.5
1,548,421 - 0.0
1,548,423 + 1.6
1,548,426 + 0.2
1,548,435 + -0.3
1,548,461 - -0.7
1,548,488 + 1.9
1,548,503 - -0.5
1,548,544 + -1.2
1,548,571 + -0.5
1,548,594 - -1.6
1,548,609 - 1.3
1,548,613 + -0.5
1,548,616 - -1.6
1,548,627 - -1.2
1,548,631 - -0.2
1,548,633 - -0.6
1,548,643 - 0.6
1,548,651 + 0.7
1,548,654 - -3.0
1,548,655 - 0.5
1,548,655 + -0.3
1,548,662 - -0.5
1,548,665 + 1.4
1,548,676 - -0.8
1,548,716 + -1.8
1,548,724 + -0.2
1,548,725 - 1.2
1,548,757 - -1.0
1,548,757 + -0.8
1,548,760 + -1.8
1,548,761 - 0.3
1,548,806 - 0.4
1,548,825 + -1.0
1,548,829 - -1.3
1,548,858 + -0.7
1,548,904 - -0.3
1,548,947 - -0.3
1,548,951 + -0.4
1,548,959 + 0.1
1,549,046 - -0.2