Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4909

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4908: 13276 - K15163 SRB8, MED12 mediator of RNA polymerase II transcription subunit 12, fungi type, at 1275228 to 1281484 13276 mRNA_4909: 13277 - KOG1339 Aspartyl protease, at 1281980 to 1284451 13277 mRNA_4910: 13278 - K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13, at 1284802 to 1288001 13278

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,280,997 - -0.2
1,281,121 - -0.8
1,281,136 + 1.4
1,281,264 - -1.5
1,281,276 + -0.9
1,281,531 + -1.0
1,281,532 - 0.3
1,281,541 - 0.2
1,281,543 - -1.0
1,281,545 - 0.2
1,281,554 + -1.5
1,281,555 - -0.5
1,281,560 - -2.3
1,281,702 - 0.1
1,281,707 - -0.5
1,281,712 + 0.5
1,281,714 - 1.5
1,281,714 - -0.4
1,281,716 + 0.0
1,281,717 + -0.0
1,281,718 + 0.6
1,281,758 - -0.9
1,281,758 - 0.3
1,281,760 - -0.1
1,281,760 + 0.6
1,281,760 + -0.9
1,281,765 - 2.3
1,281,773 - 0.5
1,281,779 + -0.0
1,281,789 + 1.3
1,281,795 + 0.9
1,281,890 - 0.3
1,282,041 - -0.7
1,282,045 - -1.3
1,282,049 + -0.8
1,282,049 - 0.3
1,282,051 + -0.1
1,282,160 - 0.1
1,282,194 - 1.4
1,282,201 - 0.5
1,282,204 + 0.2
1,282,205 - 0.3
1,282,339 - 13277 mRNA_4909 0.15 1.0
1,282,352 - 13277 mRNA_4909 0.15 -1.3
1,282,370 + 13277 mRNA_4909 0.16 0.2
1,282,516 + 13277 mRNA_4909 0.22 -3.7
1,282,536 - 13277 mRNA_4909 0.22 1.5
1,282,651 - 13277 mRNA_4909 0.27 2.2
1,282,659 + 13277 mRNA_4909 0.27 -0.5
1,282,927 - 13277 mRNA_4909 0.38 0.1
1,282,954 - 13277 mRNA_4909 0.39 -1.2
1,282,990 + 13277 mRNA_4909 0.41 0.9
1,283,111 - 13277 mRNA_4909 0.46 0.3
1,283,151 - 13277 mRNA_4909 0.47 0.0
1,283,414 - 13277 mRNA_4909 0.58 -1.8
1,283,442 + 13277 mRNA_4909 0.59 -0.0
1,283,486 + 13277 mRNA_4909 0.61 -2.8
1,283,531 - 13277 mRNA_4909 0.63 -0.6
1,284,103 - 13277 mRNA_4909 0.86 -1.1
1,284,111 + 13277 mRNA_4909 0.86 0.1
1,284,112 - 13277 mRNA_4909 0.86 0.3
1,284,656 - -0.1
1,284,657 - -0.8
1,284,707 - 0.3
1,284,826 - -0.1
1,285,372 + 13278 mRNA_4910 0.18 -1.7