Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4871

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1183221 to 1185751 13238 mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1185921 to 1188048 13239 mRNA_4872: 13240 - Hypothetical Protein, at 1188698 to 1189328 13240

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,185,075 + 13238 mRNA_4870 0.73 -1.4
1,185,332 + 13238 mRNA_4870 0.83 -0.4
1,185,336 - 13238 mRNA_4870 0.84 0.2
1,185,339 - 13238 mRNA_4870 0.84 -1.1
1,185,343 - 13238 mRNA_4870 0.84 -0.1
1,185,353 - 13238 mRNA_4870 0.84 -1.1
1,185,377 - 13238 mRNA_4870 0.85 -1.2
1,185,488 + 13238 mRNA_4870 0.90 0.2
1,185,494 - 13238 mRNA_4870 0.90 -0.9
1,185,497 + 13238 mRNA_4870 0.90 1.0
1,185,631 - -0.0
1,185,638 - -1.1
1,185,644 + -1.6
1,185,645 + -1.9
1,185,649 + -1.8
1,185,669 + 0.5
1,185,806 - 0.3
1,185,816 - 0.2
1,185,818 - 1.3
1,185,823 + -1.1
1,185,827 - 0.9
1,185,828 + -1.5
1,185,830 + 0.5
1,185,832 + 0.1
1,185,842 + 0.0
1,185,844 - -1.9
1,185,849 + 0.7
1,185,850 + -0.1
1,185,851 + -0.4
1,185,859 - 0.4
1,185,859 - -0.0
1,185,860 + -0.3
1,185,864 + -0.4
1,185,866 - -0.1
1,185,866 - 0.2
1,185,866 + -0.6
1,185,881 + -2.0
1,185,882 + -0.1
1,185,883 + -1.9
1,185,888 - 0.3
1,185,896 + -0.3
1,185,898 - 0.4
1,185,899 + 0.1
1,185,903 + -2.0
1,185,905 + -1.8
1,185,910 + -1.1
1,185,919 + 0.7
1,185,927 - 0.1
1,186,034 + 0.1
1,186,035 + -0.2
1,186,045 + 0.4
1,186,260 - 13239 mRNA_4871 0.16 0.1
1,186,300 + 13239 mRNA_4871 0.18 0.4
1,186,330 + 13239 mRNA_4871 0.19 2.1
1,186,614 + 13239 mRNA_4871 0.33 -0.7
1,186,622 + 13239 mRNA_4871 0.33 -0.0
1,187,029 - 13239 mRNA_4871 0.52 -2.1
1,187,203 + 13239 mRNA_4871 0.60 0.3
1,187,473 - 13239 mRNA_4871 0.73 0.3
1,187,762 + 13239 mRNA_4871 0.87 -0.6
1,188,056 - 0.1
1,188,061 + 0.8
1,188,205 + 0.7
1,188,219 - -2.1
1,188,222 + -1.7
1,188,245 + -0.0
1,188,248 + -2.0
1,188,390 - 0.4
1,188,533 + -0.4
1,188,539 - 1.0
1,188,672 + 0.6
1,188,676 - -1.6
1,188,678 + -0.1
1,188,679 - -3.3
1,188,697 - 1.5
1,188,699 + -0.0
1,188,713 + -2.8
1,188,792 - 13240 mRNA_4872 0.15 -1.6
1,188,823 + 13240 mRNA_4872 0.20 -0.0
1,188,828 + 13240 mRNA_4872 0.21 -0.5
1,188,854 - 13240 mRNA_4872 0.25 -1.6
1,188,970 - 13240 mRNA_4872 0.43 1.0
1,188,997 + 13240 mRNA_4872 0.47 -1.3