Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4533

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396525 to 397973 12900 mRNA_4533: 12901 - Hypothetical Protein, at 398174 to 399920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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397,232 - 12900 mRNA_4532 0.49 -2.2
397,492 + 12900 mRNA_4532 0.67 1.0
397,505 + 12900 mRNA_4532 0.68 -1.6
397,760 - 12900 mRNA_4532 0.85 0.4
398,361 - 12901 mRNA_4533 0.11 -0.1
398,489 - 12901 mRNA_4533 0.18 -1.4
398,655 - 12901 mRNA_4533 0.28 0.0
398,703 - 12901 mRNA_4533 0.30 1.0
398,770 + 12901 mRNA_4533 0.34 -0.8
399,123 + 12901 mRNA_4533 0.54 -1.5
399,261 + 12901 mRNA_4533 0.62 -3.5
399,440 + 12901 mRNA_4533 0.72 -0.9
399,690 + 12901 mRNA_4533 0.87 -0.5
399,849 + -1.6
399,852 + -0.9
399,996 + -1.2
400,010 - -0.4
400,033 - 0.2
400,173 + 0.4
400,783 + 12902 mRNA_4534 0.23 -0.8