Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4474

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4473: 12841 - K19782 DSS1, MSU1 exoribonuclease II, mitochondrial, at 265412 to 268856 12841 mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268995 to 271231 12842 mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271874 to 274192 12843

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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268,960 - 1.3
269,057 + 0.3
269,062 + -1.5
269,122 + -1.6
269,245 + 12842 mRNA_4474 0.11 -1.2
269,318 - 12842 mRNA_4474 0.14 0.4
269,330 - 12842 mRNA_4474 0.15 0.3
269,403 + 12842 mRNA_4474 0.18 -1.8
269,417 + 12842 mRNA_4474 0.19 0.8
269,420 + 12842 mRNA_4474 0.19 -0.2
269,432 + 12842 mRNA_4474 0.20 -1.8
269,554 - 12842 mRNA_4474 0.25 -0.4
269,575 - 12842 mRNA_4474 0.26 0.2
269,612 + 12842 mRNA_4474 0.28 -0.1
269,675 + 12842 mRNA_4474 0.30 0.4
270,207 + 12842 mRNA_4474 0.54 -0.3
270,324 - 12842 mRNA_4474 0.59 0.5
270,454 - 12842 mRNA_4474 0.65 -0.4
270,692 - 12842 mRNA_4474 0.76 -2.6
270,745 - 12842 mRNA_4474 0.78 0.6
270,863 + 12842 mRNA_4474 0.84 0.6
270,865 + 12842 mRNA_4474 0.84 -1.2
270,873 + 12842 mRNA_4474 0.84 1.0
271,092 - 0.1
271,158 + 0.1
271,192 + 0.5
271,316 - -0.6
271,346 + -0.6
271,349 - -1.5
271,364 - -0.4
271,372 + 0.7
271,382 - 0.3
271,407 - -0.0
271,441 + 0.2
271,457 - -0.6
271,473 - -2.1
271,483 + -0.1
271,493 + 0.6
271,514 + -0.4
271,516 + -1.0
271,564 - -0.7
271,569 - 0.6
271,570 + 0.5
271,592 - 0.0
271,598 - 1.2
271,603 - 0.2
271,604 + 1.3
271,618 - -0.1
271,618 - -0.1
271,618 + 0.0
271,624 + -1.0
271,628 + 0.3
271,639 - 1.1
271,755 - 1.1
271,804 + -0.9