Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4428

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160068 to 161346 12795 mRNA_4428: 12796 - Hypothetical Protein, at 161727 to 164031 12796 mRNA_4429: 12797 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 164549 to 166627 12797

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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160,858 - 12795 mRNA_4427 0.62 -0.5
160,875 - 12795 mRNA_4427 0.63 0.1
161,025 + 12795 mRNA_4427 0.75 0.9
161,139 - 12795 mRNA_4427 0.84 0.8
161,146 + 12795 mRNA_4427 0.84 -0.4
161,177 - 12795 mRNA_4427 0.87 -1.3
161,348 - 1.0
161,395 - 1.3
161,396 + -0.7
161,753 - -1.3
162,447 - 12796 mRNA_4428 0.31 0.2
162,501 + 12796 mRNA_4428 0.34 0.2
162,509 - 12796 mRNA_4428 0.34 -0.3
162,556 + 12796 mRNA_4428 0.36 -0.3
162,691 - 12796 mRNA_4428 0.42 0.0
162,702 + 12796 mRNA_4428 0.42 0.7
162,804 - 12796 mRNA_4428 0.47 -1.6
162,820 + 12796 mRNA_4428 0.47 1.4
163,243 - 12796 mRNA_4428 0.66 -0.7
163,354 - 12796 mRNA_4428 0.71 2.1
163,355 - 12796 mRNA_4428 0.71 -1.4
163,567 - 12796 mRNA_4428 0.80 -0.4
163,705 - 12796 mRNA_4428 0.86 0.6
163,858 + 0.2
163,941 - 1.2
164,189 - 0.5
164,190 + -2.7
164,367 - 1.1
164,375 + 1.3
164,375 + -0.1
164,422 - -0.4
164,650 + 0.6
164,670 + 0.3
164,881 + 12797 mRNA_4429 0.16 1.5
164,962 - 12797 mRNA_4429 0.20 1.5