Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4374

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4373: 12741 - SUPERFAMILY--SSF52058, at 41270 to 42990 12741 mRNA_4374: 12742 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 43132 to 46033 12742 mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46350 to 49394 12743

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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42,232 + 12741 mRNA_4373 0.56 0.1
42,540 + 12741 mRNA_4373 0.74 1.0
42,735 + 12741 mRNA_4373 0.85 0.8
42,790 + 12741 mRNA_4373 0.88 -0.1
42,864 + -0.2
42,973 + -0.5
43,033 + -0.9
43,033 + -1.5
43,160 + -0.6
43,162 - -0.7
43,311 + 0.7
43,322 - -1.3
43,373 - -0.3
43,382 + -0.2
43,425 + 12742 mRNA_4374 0.10 -0.5
43,437 + 12742 mRNA_4374 0.11 -0.6
43,541 - 12742 mRNA_4374 0.14 2.3
43,542 - 12742 mRNA_4374 0.14 0.2
43,720 + 12742 mRNA_4374 0.20 -0.3
43,871 + 12742 mRNA_4374 0.25 -0.7
43,896 - 12742 mRNA_4374 0.26 -0.7
43,905 - 12742 mRNA_4374 0.27 -0.9
43,943 - 12742 mRNA_4374 0.28 -1.8
44,151 + 12742 mRNA_4374 0.35 -0.0
44,207 - 12742 mRNA_4374 0.37 0.3
44,277 + 12742 mRNA_4374 0.39 1.5
44,319 - 12742 mRNA_4374 0.41 1.9
44,401 - 12742 mRNA_4374 0.44 -1.4
44,402 + 12742 mRNA_4374 0.44 -1.8
44,727 - 12742 mRNA_4374 0.55 -1.6
44,761 - 12742 mRNA_4374 0.56 -0.1
44,763 - 12742 mRNA_4374 0.56 -1.6
44,781 - 12742 mRNA_4374 0.57 0.7
44,838 - 12742 mRNA_4374 0.59 -0.8
44,847 - 12742 mRNA_4374 0.59 0.7
44,873 - 12742 mRNA_4374 0.60 -0.4
44,883 - 12742 mRNA_4374 0.60 -0.0
44,895 + 12742 mRNA_4374 0.61 -1.2
44,910 + 12742 mRNA_4374 0.61 1.0
45,168 - 12742 mRNA_4374 0.70 -2.2
45,173 - 12742 mRNA_4374 0.70 -0.4
45,189 + 12742 mRNA_4374 0.71 0.5
45,445 + 12742 mRNA_4374 0.80 -0.5
45,452 - 12742 mRNA_4374 0.80 -1.1
45,462 + 12742 mRNA_4374 0.80 -1.5
45,471 - 12742 mRNA_4374 0.81 0.2
45,741 - 12742 mRNA_4374 0.90 0.9
45,744 - -0.2
45,744 + 0.0
45,773 + 0.8
45,906 + -1.9
45,912 - 0.5
45,918 - 1.6
45,996 - -3.8
46,018 + 0.0
46,034 - 1.1
46,055 - -0.5
46,059 + 0.5
46,060 + -0.8
46,074 + -0.8
46,155 - -0.6
46,186 + 0.1
46,189 - 0.4
46,191 + -1.0
46,192 + -0.7
46,195 - -0.2
46,201 + -0.6
46,202 + 0.0
46,203 - -0.1
46,205 + 0.2
46,208 - -0.9
46,208 - -0.3
46,217 + -0.1
46,217 + 0.3
46,219 - 0.2
46,227 - 0.7
46,230 + 0.3
46,233 + -0.9
46,235 + -0.3
46,237 - 1.8
46,237 + -1.0
46,287 + 0.0
46,334 + -0.1
46,342 - -1.3
46,346 + -0.2
46,355 + 1.3
46,355 - -0.3
46,367 + 2.9
46,367 + 0.0
46,367 - 1.0
46,368 - -0.6
46,369 - 2.3
46,383 - 0.4
46,384 + -0.4
46,387 + 2.5
46,623 - 0.4
46,759 + 12743 mRNA_4375 0.13 0.6
46,940 - 12743 mRNA_4375 0.19 1.5
46,947 - 12743 mRNA_4375 0.20 0.3
46,956 + 12743 mRNA_4375 0.20 -0.1
46,976 + 12743 mRNA_4375 0.21 0.6