Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4309

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4308: 12676 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 1863186 to 1865063 12676 mRNA_4309: 12677 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 1865492 to 1868533 12677

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,864,946 + 0.8
1,864,963 + 1.2
1,865,082 + 0.8
1,865,088 - 0.5
1,865,092 - 0.8
1,865,093 - -0.9
1,865,096 - 0.1
1,865,109 + 0.2
1,865,109 - -0.1
1,865,110 + 1.1
1,865,111 + -0.1
1,865,130 - 0.6
1,865,150 + -0.2
1,865,150 - -0.6
1,865,151 + 0.2
1,865,158 - -0.7
1,865,160 + 1.2
1,865,193 + -0.4
1,865,195 - -0.1
1,865,201 + 0.6
1,865,201 + -1.7
1,865,205 + 1.6
1,865,221 + -0.4
1,865,230 - -1.1
1,865,231 + -0.3
1,865,335 - -1.6
1,865,340 - 0.0
1,865,363 - -0.1
1,865,364 + -0.3
1,865,509 - 2.1
1,866,083 + 12677 mRNA_4309 0.19 -1.3
1,866,371 - 12677 mRNA_4309 0.29 0.3
1,866,380 + 12677 mRNA_4309 0.29 -0.3
1,866,639 - 12677 mRNA_4309 0.38 0.8
1,866,644 - 12677 mRNA_4309 0.38 0.8
1,866,699 + 12677 mRNA_4309 0.40 -2.2
1,866,815 - 12677 mRNA_4309 0.43 -0.9
1,867,129 + 12677 mRNA_4309 0.54 0.5
1,867,236 - 12677 mRNA_4309 0.57 -1.0
1,867,383 + 12677 mRNA_4309 0.62 -0.0
1,867,417 - 12677 mRNA_4309 0.63 0.4
1,867,698 + 12677 mRNA_4309 0.73 2.3
1,867,706 - 12677 mRNA_4309 0.73 0.1
1,867,710 - 12677 mRNA_4309 0.73 -0.5
1,867,728 + 12677 mRNA_4309 0.74 2.2
1,868,133 + 12677 mRNA_4309 0.87 -0.5
1,868,133 + 12677 mRNA_4309 0.87 -0.3
1,868,410 + -0.5
1,868,624 - -0.1
1,869,043 - -1.9
1,869,141 - 0.1
1,869,141 - -1.9
1,869,311 - -0.2
1,869,476 + -0.0