Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4212

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1623456 to 1625668 12580 mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1625802 to 1627146 12581

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,622,829 - 12579 mRNA_4211 0.67 -2.4
1,622,830 + 12579 mRNA_4211 0.68 -0.2
1,623,165 + 1.7
1,623,258 - -1.4
1,623,386 + 0.1
1,623,442 + 0.1
1,623,491 - -1.6
1,623,648 - -0.1
1,624,117 + 12580 mRNA_4212 0.30 0.3
1,624,127 - 12580 mRNA_4212 0.30 -0.2
1,624,278 - 12580 mRNA_4212 0.37 -0.3
1,624,597 + 12580 mRNA_4212 0.52 -0.5
1,624,736 - 12580 mRNA_4212 0.58 -0.1
1,624,977 - 12580 mRNA_4212 0.69 -0.1
1,624,997 + 12580 mRNA_4212 0.70 0.5
1,625,152 + 12580 mRNA_4212 0.77 0.8
1,625,153 - 12580 mRNA_4212 0.77 0.9
1,625,154 - 12580 mRNA_4212 0.77 -1.3
1,625,154 - 12580 mRNA_4212 0.77 -1.0
1,625,154 - 12580 mRNA_4212 0.77 -0.5
1,625,268 - 12580 mRNA_4212 0.82 -2.2
1,625,295 - 12580 mRNA_4212 0.83 -0.2
1,625,421 - 12580 mRNA_4212 0.89 0.3
1,625,571 - 0.4
1,625,581 - 0.8
1,625,591 + 0.4
1,625,597 + -0.0
1,625,597 + 0.3
1,626,152 - 12581 mRNA_4213 0.26 0.8