Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3953

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3952: 12320 - KOG1018 Cytosine deaminase FCY1 and related enzymes, at 981802 to 983195 12320 mRNA_3953: 12321 - Hypothetical Protein, at 983358 to 984692 12321 mRNA_3954: 12322 - KOG1426 FOG RCC1 domain, at 985055 to 988023 12322

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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982,465 - 12320 mRNA_3952 0.48 -0.8
982,469 - 12320 mRNA_3952 0.48 -3.2
982,476 - 12320 mRNA_3952 0.48 -0.1
982,979 - 12320 mRNA_3952 0.84 1.7
983,188 - 0.6
983,195 + 0.9
983,203 - 0.4
983,307 + 0.7
983,503 + 12321 mRNA_3953 0.11 1.4
983,656 - 12321 mRNA_3953 0.22 -1.0
983,662 + 12321 mRNA_3953 0.23 1.0
983,918 + 12321 mRNA_3953 0.42 0.5
984,124 + 12321 mRNA_3953 0.57 0.8
984,503 + 12321 mRNA_3953 0.86 0.2
984,513 - 12321 mRNA_3953 0.87 -0.3
984,616 - -0.2
984,643 + -0.9
984,645 - 0.3
984,647 - 1.2
984,651 - -0.3
984,659 - 2.2
984,661 - -1.5
984,667 + 0.4
984,667 + -1.1
984,667 + 0.2
984,670 - 1.6
984,799 - -4.1
984,800 + -0.9
984,801 - 1.1
984,805 + -0.4
984,823 - 0.8
984,957 - -0.3
984,971 + -0.8
984,975 - 0.3
984,987 + 0.9
984,995 - 1.7
984,997 + -0.3
985,020 + -1.0
985,060 - -2.6
985,115 - 0.3
985,117 - 0.8
985,253 - -2.4
985,411 - 12322 mRNA_3954 0.12 -0.2
985,439 - 12322 mRNA_3954 0.13 -0.5
985,568 - 12322 mRNA_3954 0.17 1.1
985,570 + 12322 mRNA_3954 0.17 -0.0