Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3854

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746204 to 748742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750615 to 752769 12223

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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748,648 - -1.5
748,650 + 1.2
748,657 + -0.0
748,782 - -0.2
748,800 + 0.5
748,810 - 0.3
748,814 - 1.5
748,831 + 0.7
748,912 + -1.9
748,914 + 1.7
748,915 - -0.6
748,931 + 0.4
748,935 + 0.5
748,936 - -0.1
748,937 + 0.5
748,939 - -0.0
748,948 + 1.6
748,953 - 0.6
748,976 - -2.3
748,982 + -1.7
748,991 + 0.4
748,998 - -0.3
749,044 + 0.1
749,048 - -0.0
749,057 - -0.3
749,058 - 1.1
749,063 - -1.2
749,068 + 0.2
749,071 + -0.3
749,072 + 0.2
749,089 - -1.8
749,096 + 0.0
749,098 - 0.4
749,225 + -2.4
749,227 - -0.0
749,243 - 0.4
749,251 - -0.5
749,258 - 0.7
749,259 + -0.6
749,263 + 0.6
749,266 + -0.2
749,268 - -0.1
749,283 + 0.9
749,364 - 0.7
749,373 - -2.0
749,374 + 0.8
749,379 + -2.9
749,388 - 0.4
749,392 + -0.4
749,393 - -0.0
749,395 + 1.4
749,402 + -0.1
749,402 + 1.1
749,409 + 0.1
749,416 - 0.7
749,422 + -2.5
749,423 + 0.4
749,425 - -0.1
749,425 + 0.1
749,538 + -0.2
749,583 - 12222 mRNA_3854 0.11 -0.4
749,588 - 12222 mRNA_3854 0.11 -3.2
749,661 - 12222 mRNA_3854 0.20 -1.2
749,852 - 12222 mRNA_3854 0.42 1.5
749,999 - 12222 mRNA_3854 0.60 -0.4
750,004 + 12222 mRNA_3854 0.60 1.4
750,021 - 12222 mRNA_3854 0.62 0.3
750,046 + 12222 mRNA_3854 0.65 2.3
750,391 + -0.7
751,165 + 12223 mRNA_3855 0.26 -0.2
751,196 + 12223 mRNA_3855 0.27 -1.8