Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3643

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234465 to 241327 12011

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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233,988 - 0.2
233,998 + -0.2
234,004 + -0.7
234,155 + 0.5
234,279 + -0.1
234,535 - 0.2
235,189 - 12011 mRNA_3643 0.11 0.2
235,314 + 12011 mRNA_3643 0.12 -0.2
235,324 + 12011 mRNA_3643 0.13 -0.0
235,331 - 12011 mRNA_3643 0.13 0.5
235,441 + 12011 mRNA_3643 0.14 0.5
235,612 - 12011 mRNA_3643 0.17 -0.9
235,779 - 12011 mRNA_3643 0.19 -0.8
235,796 + 12011 mRNA_3643 0.19 -1.2
236,142 + 12011 mRNA_3643 0.24 -1.2
236,458 - 12011 mRNA_3643 0.29 0.0
236,663 - 12011 mRNA_3643 0.32 0.7
237,164 + 12011 mRNA_3643 0.39 -1.7
237,327 - 12011 mRNA_3643 0.42 0.2
237,582 + 12011 mRNA_3643 0.45 2.2
237,609 + 12011 mRNA_3643 0.46 1.3
237,648 - 12011 mRNA_3643 0.46 -0.1
237,739 + 12011 mRNA_3643 0.48 -1.7
237,900 + 12011 mRNA_3643 0.50 -1.1
238,011 + 12011 mRNA_3643 0.52 -0.9
238,188 - 12011 mRNA_3643 0.54 -2.1
238,343 + 12011 mRNA_3643 0.57 1.1
238,407 - 12011 mRNA_3643 0.57 -0.6
238,415 + 12011 mRNA_3643 0.58 -0.7
238,509 - 12011 mRNA_3643 0.59 0.3
238,528 - 12011 mRNA_3643 0.59 -0.3
238,528 - 12011 mRNA_3643 0.59 0.1
238,532 - 12011 mRNA_3643 0.59 0.5
238,538 - 12011 mRNA_3643 0.59 -0.3
238,609 - 12011 mRNA_3643 0.60 0.3
238,753 + 12011 mRNA_3643 0.62 0.6
238,893 + 12011 mRNA_3643 0.65 0.3
239,598 + 12011 mRNA_3643 0.75 -0.9
239,797 - 12011 mRNA_3643 0.78 1.9
239,798 + 12011 mRNA_3643 0.78 1.1
239,873 + 12011 mRNA_3643 0.79 0.2
240,215 - 12011 mRNA_3643 0.84 0.3
240,235 + 12011 mRNA_3643 0.84 -0.1
240,473 - 12011 mRNA_3643 0.88 1.2
240,512 - 12011 mRNA_3643 0.88 -2.0
240,553 + 12011 mRNA_3643 0.89 1.1
240,790 - 1.3
240,791 - 0.7
240,960 + 0.2
240,997 + -0.5
241,241 - -0.3
241,302 - -0.0
241,519 - 2.0
241,536 - -0.5
241,559 + 0.4
241,820 - 1.6
241,822 + 0.8
241,836 + 0.6
241,965 + 0.8
241,967 + -0.9
241,991 + 1.7
241,995 + 0.6
242,098 - 0.3
242,115 - 1.5
242,122 + 0.6
242,123 - 0.4
242,132 - 0.7
242,143 + -0.6
242,144 + -0.5
242,146 - -0.7
242,259 + 0.9
242,302 + -0.4
242,306 + 0.3