Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3594

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3593: 11961 - K06978 K06978 uncharacterized protein, at 125373 to 127423 11961 mRNA_3594: 11962 - K01555 FAH, fahA fumarylacetoacetase, at 127609 to 129068 11962 mRNA_3595: 11963 - K09838 ZEP, ABA1 zeaxanthin epoxidase, at 129467 to 131137 11963

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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127,200 - 11961 mRNA_3593 0.89 1.4
127,201 + 11961 mRNA_3593 0.89 0.3
127,205 + 11961 mRNA_3593 0.89 -0.7
127,342 - 0.9
127,366 + -0.8
127,372 + -0.5
127,375 - 1.3
127,483 + -1.5
127,486 + -0.5
127,487 - -0.3
127,504 - 1.0
127,523 - 0.4
127,527 - -1.7
127,653 - 0.0
127,681 + -0.7
127,692 - 0.3
127,720 + 0.3
127,835 + 11962 mRNA_3594 0.15 1.4
127,989 + 11962 mRNA_3594 0.26 -0.0
128,247 - 11962 mRNA_3594 0.44 0.3
128,271 + 11962 mRNA_3594 0.45 1.7
128,548 - 11962 mRNA_3594 0.64 -0.2
128,693 + 11962 mRNA_3594 0.74 -0.3
129,007 + 2.7
129,304 - 0.1
129,856 - 11963 mRNA_3595 0.23 1.0