Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3538

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3538: 11906 - BLAST TPR-like protein [Sanghuangporus baumii], at 2213 to 2737 11906

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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1,256 - 0.3
1,278 + 0.9
1,336 + 0.2
1,371 - -0.0
1,404 - -0.9
1,429 + 1.8
1,450 + -0.3
1,528 + 0.6
1,550 + -0.1
1,647 - -0.1
1,653 + 0.3
1,661 - 0.2
1,663 + -0.1
1,719 + -1.0
1,720 + -0.5
1,760 + -1.1
1,814 - -0.2
1,902 - -0.5
1,920 - -1.6
2,174 - 0.2
2,277 + 11906 mRNA_3538 0.12 -0.6
2,357 - 11906 mRNA_3538 0.27 -0.8
2,357 - 11906 mRNA_3538 0.27 -0.7
2,480 + 11906 mRNA_3538 0.51 1.6
2,539 - 11906 mRNA_3538 0.62 0.1
2,566 + 11906 mRNA_3538 0.67 -1.7
2,607 + 11906 mRNA_3538 0.75 0.1
2,761 - -2.7
2,818 + -0.9
2,878 + -0.8
2,933 + -0.6
3,007 + -1.6
3,028 - -0.2
3,039 + -0.5
3,046 - -1.3
3,147 + -0.5
3,283 + -2.1
3,288 + -0.1
3,288 - 0.1
3,289 + 0.0
3,341 + -2.0
3,436 + -0.3
3,617 - -1.0
3,721 - -1.1
3,731 - 1.2
3,737 + 0.0
3,737 + 0.2
3,737 + -0.8