Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3533

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325882 to 326936 11900 mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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326,136 - 11900 mRNA_3532 0.24 -0.7
326,152 - 11900 mRNA_3532 0.26 -2.7
326,158 + 11900 mRNA_3532 0.26 1.0
326,167 - 11900 mRNA_3532 0.27 0.0
326,179 + 11900 mRNA_3532 0.28 0.1
326,192 - 11900 mRNA_3532 0.29 0.4
326,202 - 11900 mRNA_3532 0.30 0.1
326,249 - 11900 mRNA_3532 0.35 0.4
326,266 - 11900 mRNA_3532 0.36 -0.0
326,266 + 11900 mRNA_3532 0.36 2.2
326,274 - 11900 mRNA_3532 0.37 -0.8
326,290 + 11900 mRNA_3532 0.39 0.2
326,312 - 11900 mRNA_3532 0.41 0.3
326,326 + 11900 mRNA_3532 0.42 -0.6
326,326 + 11900 mRNA_3532 0.42 0.6
326,326 - 11900 mRNA_3532 0.42 0.4
326,343 - 11900 mRNA_3532 0.44 -0.8
326,347 + 11900 mRNA_3532 0.44 0.4
326,364 - 11900 mRNA_3532 0.46 0.4
326,365 - 11900 mRNA_3532 0.46 -0.0
326,390 - 11900 mRNA_3532 0.48 0.4
326,391 + 11900 mRNA_3532 0.48 0.1
326,419 - 11900 mRNA_3532 0.51 -1.6
326,426 - 11900 mRNA_3532 0.52 -0.3
326,531 - 11900 mRNA_3532 0.62 0.3
326,545 + 11900 mRNA_3532 0.63 1.6
326,554 + 11900 mRNA_3532 0.64 1.6
326,640 + 11900 mRNA_3532 0.72 -0.5
326,682 - 11900 mRNA_3532 0.76 -0.5
326,835 - 0.5
326,842 + 1.0
326,973 + -1.3
327,163 + -1.6
327,533 - 11901 mRNA_3533 0.15 -3.3
327,606 - 11901 mRNA_3533 0.18 -1.5
327,901 - 11901 mRNA_3533 0.28 -1.5
328,024 + 11901 mRNA_3533 0.32 -3.9
328,216 + 11901 mRNA_3533 0.39 -1.8
328,567 - 11901 mRNA_3533 0.51 -3.1
328,932 + 11901 mRNA_3533 0.63 -1.4
329,027 - 11901 mRNA_3533 0.67 -3.3
329,199 + 11901 mRNA_3533 0.73 -3.6
329,199 + 11901 mRNA_3533 0.73 -1.4
329,220 + 11901 mRNA_3533 0.73 -1.4
329,236 + 11901 mRNA_3533 0.74 -1.0
329,668 - 11901 mRNA_3533 0.89 -1.9
329,724 + -0.9
329,763 + -1.2
329,931 + -2.8
330,208 + 0.7
330,213 + -1.5
330,232 + 0.1
330,242 - 0.9
330,343 + 2.4
330,361 - 0.4
330,485 - 0.5
330,509 + 0.2
330,653 + 0.2