Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3477

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3476: 11844 - K01915 glnA, GLUL glutamine synthetase, at 198470 to 200585 11844 mRNA_3477: 11845 - K07088 K07088 uncharacterized protein, at 201579 to 204327 11845 mRNA_3478: 11846 - SUPERFAMILY--SSF56112, at 204722 to 206830 11846

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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200,624 + 0.4
200,627 - 0.0
200,630 + -0.1
200,631 - 0.4
200,637 + -0.7
200,648 - 0.2
200,648 + 0.3
200,650 + 0.9
200,702 - 1.1
200,703 + 0.5
200,705 - 0.1
200,707 - -0.0
200,707 - -0.1
200,709 + 0.7
200,709 - -1.3
200,717 - -2.3
200,727 + 0.1
200,734 - 0.2
200,739 - -0.1
200,779 + 1.8
200,846 - -0.1
200,847 - -2.7
200,865 - 0.4
200,868 + -1.5
200,871 + -0.2
200,874 + 0.4
200,882 + -0.0
200,890 - 0.3
201,008 + -0.1
201,022 + 0.3
201,026 + 0.1
201,032 - 1.4
201,177 - -1.1
201,178 + -0.3
201,208 + 0.2
201,429 - 0.6
201,432 + -0.3
201,602 + 1.1
201,884 - 11845 mRNA_3477 0.11 -0.8
202,630 + 11845 mRNA_3477 0.38 1.1
203,158 + 11845 mRNA_3477 0.57 0.5
203,850 + 11845 mRNA_3477 0.83 -0.4
204,086 + 2.1
204,093 + -0.6
204,275 - -1.0
204,292 + 0.4
204,411 - -0.7
204,562 + 0.8
204,863 - -0.0