Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3374

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3373: 11741 - K00390 cysH phosphoadenosine phosphosulfate reductase, at 523671 to 524664 11741 mRNA_3374: 11742 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 525330 to 527850 11742 mRNA_3375: 11743 - Hypothetical Protein, at 528388 to 528831 11743

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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524,490 + 11741 mRNA_3373 0.82 -2.5
524,504 - 11741 mRNA_3373 0.84 0.0
524,553 - 11741 mRNA_3373 0.89 -1.4
524,647 - -1.2
524,675 - -0.5
524,703 + -1.3
524,825 - 0.1
524,833 - 1.7
524,834 - 0.0
524,838 + -0.8
524,839 + -0.8
524,843 - 0.2
524,843 - 0.5
524,849 - -0.4
524,850 + 0.7
524,850 + 0.2
524,853 - 1.0
524,856 - -0.4
524,860 - -0.3
524,861 + 0.1
524,863 + 0.3
524,864 - 0.1
524,867 - -0.7
524,874 - 0.4
524,878 - -0.2
524,896 - -1.5
524,903 + -0.4
524,909 + -0.1
524,922 - 0.0
524,923 + 0.9
524,966 - -0.0
525,046 - 0.7
525,046 + 2.0
525,053 - -0.7
525,068 - 1.2
525,071 - 0.2
525,078 + -1.1
525,078 - -0.5
525,079 + -0.1
525,080 + -0.3
525,080 + -0.1
525,090 - -1.5
525,094 - -0.8
525,101 + -0.9
525,102 + 0.7
525,126 + 1.1
525,151 + -0.3
525,187 - -1.1
525,216 - 0.6
525,237 - 0.3
525,240 + 2.2
525,256 + -1.2
525,291 - 0.4
525,310 + 1.0
525,326 + -0.5
525,367 + -1.0
525,367 + 0.3
525,497 + -0.3
525,642 - 11742 mRNA_3374 0.12 0.5
526,322 - 11742 mRNA_3374 0.39 -0.9
526,331 + 11742 mRNA_3374 0.40 -0.8
527,072 + 11742 mRNA_3374 0.69 0.0
527,188 + 11742 mRNA_3374 0.74 -0.5
527,210 - 11742 mRNA_3374 0.75 -2.0
527,323 + 11742 mRNA_3374 0.79 -3.8
527,475 - 11742 mRNA_3374 0.85 -1.0
527,483 - 11742 mRNA_3374 0.85 -0.3
527,486 + 11742 mRNA_3374 0.86 0.2
527,776 - -0.7
527,799 - 0.8
527,810 - -1.2
527,922 + 0.4
527,997 + -3.9
528,021 - 0.3
528,022 - -0.1
528,038 + -0.8
528,061 + -1.2
528,071 - 1.8
528,091 + 0.1
528,091 - -0.2
528,182 - -0.4
528,236 + 0.2
528,359 - 0.2
528,401 + 0.7
528,486 - 11743 mRNA_3375 0.22 0.1
528,667 + 11743 mRNA_3375 0.63 -0.5
528,845 + -0.7
528,846 + 1.3