Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3239

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3238: 11606 - BLAST RNA replication protein [Rhizoctonia solani], at 184726 to 188428 11606 mRNA_3239: 11607 - K15425 PPP4R2 serine/threonine-protein phosphatase 4 regulatory subunit 2, at 188570 to 189872 11607

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
187,714 + 11606 mRNA_3238 0.81 0.3
187,717 - 11606 mRNA_3238 0.81 -0.1
187,720 + 11606 mRNA_3238 0.81 1.1
188,288 + 0.6
188,346 + 0.4
188,674 + 1.0
188,680 - 0.7
188,738 - 11607 mRNA_3239 0.13 -0.6
188,782 + 11607 mRNA_3239 0.16 1.0
188,789 + 11607 mRNA_3239 0.17 0.0
188,792 - 11607 mRNA_3239 0.17 0.7
188,985 + 11607 mRNA_3239 0.32 -0.3
189,049 - 11607 mRNA_3239 0.37 0.1
189,207 - 11607 mRNA_3239 0.49 -1.5
189,221 - 11607 mRNA_3239 0.50 -0.4
189,348 + 11607 mRNA_3239 0.60 1.1
189,385 - 11607 mRNA_3239 0.63 1.6
189,537 - 11607 mRNA_3239 0.74 0.3
189,663 - 11607 mRNA_3239 0.84 -1.0
189,800 + 0.6
189,862 - 0.4
189,953 - 0.5
190,061 + 0.1
190,075 + -0.4
190,081 + 0.5
190,236 - 1.4
190,244 + -0.1
190,248 - -0.3
190,265 + 1.8
190,433 - 0.7
190,548 - -1.1
190,596 + -0.2