Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3172

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3171: 11539 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 4085 to 5766 11539 mRNA_3172: 11540 - Hypothetical Protein, at 6329 to 7697 11540 mRNA_3173: 11541 - K09497 CCT5 T-complex protein 1 subunit epsilon, at 7947 to 10272 11541

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
5,341 - 11539 mRNA_3171 0.75 -0.2
5,477 + 11539 mRNA_3171 0.83 1.8
5,496 - 11539 mRNA_3171 0.84 1.2
5,503 + 11539 mRNA_3171 0.84 -0.3
5,510 + 11539 mRNA_3171 0.85 -1.2
5,514 + 11539 mRNA_3171 0.85 1.3
5,600 + -0.8
5,646 - -0.6
5,663 - -0.2
5,664 + -0.8
5,769 + -0.8
5,779 - 0.2
5,781 + 0.1
5,795 - 0.3
5,801 - -1.8
5,801 + 0.6
5,803 - 0.8
5,822 - 0.8
5,824 + -0.3
5,828 - 0.3
5,835 - -0.1
5,836 - 1.3
5,836 + 0.1
5,841 - -0.3
5,842 + -0.2
5,852 - -0.1
5,868 - -0.6
5,971 + -1.2
5,974 + 0.2
5,974 - -0.4
5,978 + 1.1
5,979 - -0.4
5,981 + 0.6
5,983 + 0.2
5,984 + 0.7
5,989 - 0.4
5,991 + -1.2
6,000 + 0.5
6,001 + 0.1
6,002 - -0.3
6,008 + -0.4
6,040 - 1.9
6,068 + 0.1
6,084 + 2.8
6,084 - -0.6
6,089 + 2.7
6,094 - -0.1
6,095 - -0.2
6,096 + 2.2
6,097 + -1.5
6,099 - -0.2
6,100 + -0.2
6,110 - -0.1
6,150 + 0.0
6,153 - -0.3
6,167 + 0.4
6,180 + -1.6
6,186 - 0.6
6,194 + -0.2
6,204 + 0.0
6,230 + -0.9
6,252 - 0.9
6,310 - -0.4
6,311 - 0.0
6,321 - 0.3
6,323 + -0.2
6,327 + 0.3
6,328 - 0.3
6,330 - 0.3
6,332 - 0.8
6,333 + 0.7
6,333 + -0.2
6,334 - -0.4
6,343 + -0.9
6,347 - -0.0
6,348 + 2.6
6,349 + 0.7
6,349 - 0.9
6,353 + -0.3
6,362 - -1.7
6,364 + -0.0
6,368 + -0.4
6,369 + 0.5
6,370 + 0.5
6,372 + -1.3
6,376 - 0.4
6,387 + 0.1
6,390 - -0.8
6,392 + 0.2
6,403 + -0.2
6,408 + -0.5
6,410 + -1.0
6,419 + 0.1
6,466 + 11540 mRNA_3172 0.10 -0.7
6,471 + 11540 mRNA_3172 0.10 0.4
6,501 + 11540 mRNA_3172 0.13 -0.5
6,512 + 11540 mRNA_3172 0.13 0.2
6,520 + 11540 mRNA_3172 0.14 1.4
6,556 - 11540 mRNA_3172 0.17 0.2
6,563 + 11540 mRNA_3172 0.17 -0.2
6,570 + 11540 mRNA_3172 0.18 -1.0
6,577 + 11540 mRNA_3172 0.18 -0.4
6,580 + 11540 mRNA_3172 0.18 -0.5
6,652 - 11540 mRNA_3172 0.24 0.2
6,680 + 11540 mRNA_3172 0.26 0.8
6,730 - 11540 mRNA_3172 0.29 0.3
6,750 - 11540 mRNA_3172 0.31 0.6
6,886 + 11540 mRNA_3172 0.41 -1.6
6,998 - 11540 mRNA_3172 0.49 -0.3
7,000 - 11540 mRNA_3172 0.49 -1.0
7,011 + 11540 mRNA_3172 0.50 -0.2
7,286 + 11540 mRNA_3172 0.70 -0.1
7,389 + 11540 mRNA_3172 0.77 0.2
7,459 + 11540 mRNA_3172 0.83 0.3
7,565 + 0.7
7,619 + 0.0
7,740 - 0.0
7,759 + -0.5
7,902 - -0.0
7,928 + 0.6