Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3104

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3103: 11471 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 328830 to 331254 11471 mRNA_3104: 11472 - HMMPfam-Uncharacterized conserved protein (DUF2156)-PF09924, at 331820 to 333279 11472

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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330,999 + 11471 mRNA_3103 0.89 -0.1
331,303 - 0.7
331,419 + 0.4
331,430 + 0.8
331,584 - 3.0
331,593 + 1.2
331,859 + -0.5
331,864 + -1.4
331,875 - 0.4
331,877 + 0.7
332,159 - 11472 mRNA_3104 0.23 -0.9
332,167 + 11472 mRNA_3104 0.24 -0.2
332,298 + 11472 mRNA_3104 0.33 -0.7
332,611 + 11472 mRNA_3104 0.54 -0.1
332,657 - 11472 mRNA_3104 0.57 0.0
332,721 - 11472 mRNA_3104 0.62 -2.2
332,721 + 11472 mRNA_3104 0.62 -0.0
332,842 + 11472 mRNA_3104 0.70 -0.2
332,857 - 11472 mRNA_3104 0.71 0.3
332,864 + 11472 mRNA_3104 0.72 -0.1
333,022 + 11472 mRNA_3104 0.82 -2.1
333,029 - 11472 mRNA_3104 0.83 1.5
333,033 - 11472 mRNA_3104 0.83 1.6
333,035 + 11472 mRNA_3104 0.83 0.1
333,148 - -0.1
333,182 + 0.0
333,284 - 0.1
333,289 + 1.3
333,315 + -0.0
333,315 - -1.5
333,322 - 0.7
333,324 + -0.3
333,342 - 0.4
333,364 + 0.8
333,366 + 0.6
333,470 + -0.6
333,471 + 0.4
333,472 - -0.3
333,472 + -0.1
333,475 - 1.1
333,480 - -0.5
333,481 + -0.5
333,482 - 0.0
333,484 - 0.6
333,485 - 0.8
333,485 + -0.7
333,486 - -0.1
333,487 - -0.6
333,489 + 0.5
333,489 - -0.0
333,489 + 0.3
333,489 + 1.5
333,493 + 0.9
333,499 - 0.2
333,500 + -0.2
333,501 + 0.3
333,501 + 0.6
333,502 + 0.0
333,514 + 0.2
333,516 - -0.0
333,518 - -2.0
333,519 + -0.6
333,520 + 0.1
333,523 - -1.0
333,523 + -0.3
333,532 - 1.8
333,537 + -0.7
333,554 - 0.2
333,582 + 0.3
333,646 - -1.9
333,648 - 0.1
333,653 + 0.5
333,657 + 0.7
333,657 + 0.3
333,662 + 0.1
333,663 - -0.2
333,663 - 0.4
333,664 - 0.2
333,664 + 0.3
333,665 + -1.7
333,666 - -1.5
333,667 - -0.1
333,674 - 2.0
333,675 - 0.6
333,676 - 0.3
333,676 + -0.6
333,676 + -0.1
333,681 - 0.0
333,705 + 1.4
333,706 - 0.4
333,706 - 0.8
333,706 - -0.1
333,706 - 0.6
333,707 - 1.8
333,708 - 0.7
333,708 - -0.3
333,708 - -1.1
333,718 + -0.6
333,718 - 0.7
333,720 - 1.5
333,729 - -0.5
333,730 - 1.2
333,733 - -1.6
333,735 + -0.6
333,749 + 0.5
333,754 - -0.6
333,767 - -1.5
333,768 + 0.4
333,783 + 0.2
333,788 + -1.0
333,798 + -1.2
333,843 + -0.8
333,889 - 0.5
333,889 - -0.4
333,905 - -0.1
333,905 - -0.3
333,906 + 0.2
333,910 - 0.0
333,914 - 0.3
333,915 + 0.1
333,920 + 0.6
333,923 + 0.9
333,925 - -0.7
333,929 + 1.1
333,968 + -0.7
334,021 + 0.0
334,045 - -0.8
334,073 + -0.4
334,086 - 0.3
334,088 + -1.8
334,089 + -2.4
334,107 + 0.8
334,117 + 1.1
334,195 - 0.1
334,207 - 0.4
334,214 - 0.1
334,214 - 0.3
334,217 - 0.7
334,225 + 0.7
334,227 + -1.0
334,228 + -0.4
334,234 - 0.6
334,246 - -0.9
334,248 - 1.0
334,249 + 0.3
334,253 - 1.6
334,259 + 1.3