Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2995

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2994: 11362 - K14729 FOX2 multifunctional beta-oxidation protein, at 30118 to 34295 11362 mRNA_2995: 11363 - K20290 COG3, SEC34 conserved oligomeric Golgi complex subunit 3, at 34550 to 37704 11363 mRNA_2996: 11364 - Hypothetical Protein, at 37820 to 39043 11364

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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33,554 + 11362 mRNA_2994 0.82 1.2
33,814 + 11362 mRNA_2994 0.88 -1.1
33,902 - 0.0
34,049 - -0.2
34,167 - -0.0
34,189 + 3.0
34,208 + 1.4
34,212 - -0.5
34,217 + -0.9
34,220 + 1.8
34,352 + 2.8
34,355 - -1.9
34,358 + -1.3
34,364 - -1.5
34,371 - 0.4
34,377 + 0.6
34,384 + 0.8
34,387 - -0.2
34,402 + 0.1
34,408 - -0.8
34,421 + -0.3
34,431 + -1.5
34,648 + 1.5
34,697 + 1.1
34,697 + 0.5
35,117 - 11363 mRNA_2995 0.18 0.0
35,245 - 11363 mRNA_2995 0.22 0.2
35,247 - 11363 mRNA_2995 0.22 -0.2
35,579 - 11363 mRNA_2995 0.33 -2.9
35,693 - 11363 mRNA_2995 0.36 0.1
35,751 - 11363 mRNA_2995 0.38 0.5
36,003 + 11363 mRNA_2995 0.46 0.4
36,165 + 11363 mRNA_2995 0.51 -1.7
36,261 + 11363 mRNA_2995 0.54 -0.3
36,278 - 11363 mRNA_2995 0.55 1.1
36,410 - 11363 mRNA_2995 0.59 0.5
36,440 - 11363 mRNA_2995 0.60 -0.5
36,612 - 11363 mRNA_2995 0.65 -0.1
36,682 + 11363 mRNA_2995 0.68 0.4
36,683 - 11363 mRNA_2995 0.68 1.5
36,808 + 11363 mRNA_2995 0.72 0.5
36,821 + 11363 mRNA_2995 0.72 -0.3
36,821 + 11363 mRNA_2995 0.72 0.9
36,825 - 11363 mRNA_2995 0.72 0.7
36,856 - 11363 mRNA_2995 0.73 -2.0
37,048 - 11363 mRNA_2995 0.79 -1.6
37,381 + 11363 mRNA_2995 0.90 -2.2
37,649 + -2.3
37,733 - -0.3
37,778 - 1.0