Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2901

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2900: 11268 - BLAST pyridoxamine-phosphate oxidase [Moniliophthora ro..., at 493675 to 494245 11268 mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494917 to 497480 11269 mRNA_2902: 11270 - K20367 ERGIC3, ERV46 endoplasmic reticulum-Golgi intermediate compartment protein 3, at 498164 to 500409 11270

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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494,113 + 11268 mRNA_2900 0.77 -0.4
494,367 + 0.1
494,433 + 0.2
494,489 + -1.3
494,513 + 0.2
494,547 + -0.5
494,604 - 1.3
494,604 - 0.9
494,635 - 1.0
494,646 + -0.0
494,651 + -2.9
494,655 + 0.9
494,655 - 0.1
494,656 + 0.0
494,684 + 1.1
494,684 - -0.4
494,687 - 0.6
494,692 - -0.5
494,699 - -0.5
494,700 - 0.3
494,701 + 0.2
494,717 + -1.7
494,722 - -1.5
494,816 + -0.7
494,818 - 0.7
494,837 - -0.7
494,851 - 0.5
494,861 + -0.3
494,874 + -0.4
494,927 - 0.3
494,988 - -0.4
495,011 - -1.5
495,016 - 0.6
495,052 + -2.7
495,129 - -0.3
495,162 - 0.3
495,276 + 11269 mRNA_2901 0.14 0.3
495,336 + 11269 mRNA_2901 0.16 -0.3
495,578 - 11269 mRNA_2901 0.26 -1.4
495,745 + 11269 mRNA_2901 0.32 -0.1
495,778 - 11269 mRNA_2901 0.34 -0.6
496,459 - 11269 mRNA_2901 0.60 -1.1
496,502 - 11269 mRNA_2901 0.62 -0.5
496,591 + 11269 mRNA_2901 0.65 -0.8
496,602 - 11269 mRNA_2901 0.66 -0.2
496,713 - 11269 mRNA_2901 0.70 0.7
496,727 + 11269 mRNA_2901 0.71 1.8
496,786 - 11269 mRNA_2901 0.73 -0.0
497,060 + 11269 mRNA_2901 0.84 -1.2
497,175 - 11269 mRNA_2901 0.88 -1.8
497,180 + 11269 mRNA_2901 0.88 0.2
497,457 - 2.3
497,725 + -1.3
497,886 + 0.8
497,917 + -1.8
497,935 + 0.0
497,999 - -1.2
498,064 - -1.4
498,101 - 0.9
498,191 - -0.1
498,232 - -0.1