Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2848

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351577 to 353493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354444 to 356897 11216

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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353,644 - 0.3
353,672 + -1.4
353,951 + -0.9
353,956 - 0.5
353,957 - 0.1
353,966 - 1.6
353,970 - -0.7
353,990 + -0.3
354,300 - -0.9
354,327 + -1.8
354,553 - -3.0
354,590 + -0.1
354,591 + 0.1
354,594 - 0.1
354,628 - -0.1
354,730 - 11216 mRNA_2848 0.12 1.3
354,763 + 11216 mRNA_2848 0.13 0.2
355,032 - 11216 mRNA_2848 0.24 0.3
355,032 - 11216 mRNA_2848 0.24 1.0
355,040 + 11216 mRNA_2848 0.24 -0.3
355,045 - 11216 mRNA_2848 0.24 -0.8
355,145 - 11216 mRNA_2848 0.29 0.3
355,148 - 11216 mRNA_2848 0.29 0.4
355,159 + 11216 mRNA_2848 0.29 0.7
355,284 + 11216 mRNA_2848 0.34 0.4
355,327 + 11216 mRNA_2848 0.36 0.9
355,334 + 11216 mRNA_2848 0.36 1.3
355,435 - 11216 mRNA_2848 0.40 0.1
355,455 + 11216 mRNA_2848 0.41 -0.1
355,465 + 11216 mRNA_2848 0.42 -1.1
355,712 + 11216 mRNA_2848 0.52 0.8
355,742 - 11216 mRNA_2848 0.53 -2.4
355,752 + 11216 mRNA_2848 0.53 1.0
355,765 - 11216 mRNA_2848 0.54 1.0
356,073 - 11216 mRNA_2848 0.66 0.1
356,191 - 11216 mRNA_2848 0.71 -1.7
356,244 - 11216 mRNA_2848 0.73 0.2
356,598 + 11216 mRNA_2848 0.88 -0.3
356,748 - -0.8
356,749 - -1.3
356,965 - 0.1
357,081 - -0.1
357,083 - 0.8
357,083 - 2.0
357,251 + -0.2
357,259 - -2.6
357,264 - 2.2
357,273 + -0.7
357,326 + 0.6
357,408 - 1.0
357,426 + 1.8
357,603 - 0.0
357,713 + -1.7
357,876 + -0.1