Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2779

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2778: 11146 - K15264 NSUN5, WBSCR20 putative methyltransferase, at 188984 to 191295 11146 mRNA_2779: 11147 - K18278 THI5 pyrimidine precursor biosynthesis enzyme, at 191425 to 193018 11147

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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190,735 + 11146 mRNA_2778 0.76 0.1
190,941 - 11146 mRNA_2778 0.85 -1.4
190,942 + 11146 mRNA_2778 0.85 -1.7
190,964 - 11146 mRNA_2778 0.86 -0.6
190,970 + 11146 mRNA_2778 0.86 0.4
191,153 - 0.6
191,153 + -2.5
191,161 + 0.7
191,319 + -0.7
191,320 - -1.3
191,348 - 0.9
191,430 - 0.3
191,441 - -0.9
191,552 + 0.0
191,580 - 1.1
191,763 + 11147 mRNA_2779 0.21 0.2
191,794 + 11147 mRNA_2779 0.23 -1.4
192,023 - 11147 mRNA_2779 0.38 -2.0
192,129 + 11147 mRNA_2779 0.44 -0.5
192,420 + 11147 mRNA_2779 0.62 0.0
192,733 - 11147 mRNA_2779 0.82 0.7
192,852 - 11147 mRNA_2779 0.90 -0.7
192,990 + 1.9
192,990 + 1.1
192,995 - 1.3
193,008 + 0.9
193,018 - 0.2
193,021 + 0.4
193,052 + -0.7
193,120 + 0.5
193,253 + -0.5
193,285 - -0.1
193,308 + 0.1
193,309 - 0.0
193,310 - 0.0
193,318 + -0.1
193,321 - 0.6
193,330 + -0.2
193,383 - -0.9
193,384 + 0.6
193,391 + 0.7
193,397 - 0.4
193,397 - -0.0
193,404 + 0.1
193,414 - -0.2
193,435 - -0.3
193,462 - -0.5
193,478 - 1.4
193,480 - -0.4
193,489 - 0.7
193,522 - 0.7
193,529 + 1.9
193,543 + -0.5
193,563 + 0.3
193,573 - -0.9
193,578 + 0.9
193,578 + -0.3
193,582 + 0.1
193,600 + -1.9
193,615 - 2.4
193,621 + -2.3
193,622 + 1.5
193,623 + -0.4
193,703 + -0.2
193,745 + 0.8
193,749 + 0.0
193,875 - 0.3
193,900 + 0.2