Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2640

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008 mRNA_2641: 11009 - Hypothetical Protein, at 658203 to 659346 11009

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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655,990 - 1.1
656,142 + 0.2
656,158 + 0.5
656,161 + 0.2
656,328 + 0.1
656,329 - -1.1
656,461 + 0.3
656,573 - -1.8
656,596 + 0.5
656,606 - 1.3
656,769 - -1.8
656,882 + 1.0
657,163 + 11008 mRNA_2640 0.21 0.6
657,202 - 11008 mRNA_2640 0.25 -0.5
657,202 + 11008 mRNA_2640 0.25 -0.2
657,462 - 11008 mRNA_2640 0.52 1.3
657,487 + 11008 mRNA_2640 0.55 -0.1
657,500 - 11008 mRNA_2640 0.56 -0.9
657,534 - 11008 mRNA_2640 0.60 1.0
657,537 - 11008 mRNA_2640 0.60 0.8
657,537 - 11008 mRNA_2640 0.60 0.2
657,559 - 11008 mRNA_2640 0.62 -1.7
657,563 + 11008 mRNA_2640 0.63 1.6
657,569 - 11008 mRNA_2640 0.63 -1.0
657,570 + 11008 mRNA_2640 0.63 0.6
657,609 - 11008 mRNA_2640 0.67 0.6
657,615 + 11008 mRNA_2640 0.68 -0.7
657,619 + 11008 mRNA_2640 0.68 1.3
657,619 + 11008 mRNA_2640 0.68 -1.4
657,620 - 11008 mRNA_2640 0.69 -1.0
657,636 - 11008 mRNA_2640 0.70 0.2
657,638 + 11008 mRNA_2640 0.70 0.1
657,645 + 11008 mRNA_2640 0.71 0.4
657,682 - 11008 mRNA_2640 0.75 0.1
657,691 - 11008 mRNA_2640 0.76 -1.2
657,778 - 11008 mRNA_2640 0.85 0.3
657,787 + 11008 mRNA_2640 0.86 -0.4
657,811 + 11008 mRNA_2640 0.89 0.9
657,812 - 11008 mRNA_2640 0.89 -0.6
657,820 - 11008 mRNA_2640 0.89 0.3
657,832 + 0.3
657,832 + -0.2
657,857 - 0.8
657,882 - -0.3
657,883 - 0.3
657,886 - 0.1
657,898 + 0.4
657,910 - 0.5
657,914 - 0.6
657,920 - -0.7
657,920 + -1.9
657,934 - -0.0
657,939 - 0.4
657,942 + -0.7
657,953 - -0.1
657,954 + 0.8
657,975 + 0.5
657,975 - 0.9
657,995 + -0.1
657,997 - -1.5
657,997 - 0.5
657,998 - 0.8
658,000 + 1.3
658,003 - 0.2
658,008 - -0.5
658,009 - 0.3
658,018 - -0.3
658,019 - 0.1
658,020 - 0.5
658,022 - -2.9
658,043 + 1.4
658,056 - 0.7
658,130 - 1.0
658,156 - 2.1
658,161 - -0.1
658,166 + -0.0
658,192 + -0.4
658,206 - 0.1
658,287 - -0.2
658,298 - -0.3
658,309 + 1.9
658,377 - 11009 mRNA_2641 0.15 1.0
658,433 + 11009 mRNA_2641 0.20 0.4
658,633 + 11009 mRNA_2641 0.38 0.5
658,645 + 11009 mRNA_2641 0.39 0.2
658,769 - 11009 mRNA_2641 0.49 -1.8