Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2522

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346896 to 348680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351016 to 351939 10891

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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348,269 - 10889 mRNA_2521 0.77 -0.2
348,617 + 0.7
348,680 + 0.7
348,709 + -2.8
348,713 - 0.1
348,724 - -0.4
348,747 - -0.5
348,748 + -1.4
348,748 + 0.6
348,749 + -0.2
348,752 + 0.3
348,763 - 0.2
348,776 + -1.2
348,778 - -0.4
348,805 + 0.1
348,841 + 0.2
348,855 + -0.1
348,857 - 1.2
348,859 - -0.2
348,860 + -0.0
348,864 + 1.6
348,866 - 1.6
348,868 - 0.3
348,869 + 0.4
348,869 + 0.6
348,894 - -1.9
348,896 - 0.3
348,900 + 1.2
348,901 + 0.3
348,902 + -0.4
348,904 + -1.5
348,931 + -3.3
348,991 - 10890 mRNA_2522 0.12 -0.1
348,998 - 10890 mRNA_2522 0.13 1.0
349,012 - 10890 mRNA_2522 0.14 -0.1
349,012 - 10890 mRNA_2522 0.14 0.8
349,023 - 10890 mRNA_2522 0.14 0.3
349,031 - 10890 mRNA_2522 0.15 0.6
349,044 + 10890 mRNA_2522 0.16 1.0
349,068 - 10890 mRNA_2522 0.18 -2.9
349,181 + 10890 mRNA_2522 0.27 -0.3
349,208 - 10890 mRNA_2522 0.29 -0.5
349,210 + 10890 mRNA_2522 0.29 -0.4
349,380 + 10890 mRNA_2522 0.42 0.2
349,512 + 10890 mRNA_2522 0.52 -0.2
349,627 - 10890 mRNA_2522 0.61 -0.2
349,913 + 10890 mRNA_2522 0.83 -2.6
349,931 - 10890 mRNA_2522 0.84 0.2
349,936 + 10890 mRNA_2522 0.85 -0.2
350,418 + 0.3
350,591 + -1.1
350,629 - 2.3
350,686 + -0.9
350,951 - 1.5