Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2515

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2514: 10882 - Hypothetical Protein, at 330199 to 330672 10882 mRNA_2515: 10883 - KOG0035 Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily), at 330969 to 334313 10883 mRNA_2516: 10884 - KOG0627 Heat shock transcription factor, at 334568 to 336151 10884

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
329,983 - -1.0
330,024 + 0.1
330,026 + -2.6
330,238 + -1.4
330,404 + 10882 mRNA_2514 0.43 0.2
330,459 - 10882 mRNA_2514 0.55 0.3
330,591 - 10882 mRNA_2514 0.83 -0.4
330,605 + 10882 mRNA_2514 0.86 -1.6
330,608 + 10882 mRNA_2514 0.86 -0.1
330,647 - -0.2
330,647 - 0.7
330,741 - -0.1
330,751 - -0.2
330,764 + 0.8
330,787 - -0.0
330,793 - 0.5
330,794 + -0.5
330,794 + 0.9
330,797 - 0.3
330,920 + -1.9
330,924 + 0.1
330,925 + -1.3
332,388 + 10883 mRNA_2515 0.42 -1.6
332,598 + 10883 mRNA_2515 0.49 0.1
332,781 - 10883 mRNA_2515 0.54 -2.2
334,252 + -3.1
334,321 + 0.1
335,112 - 10884 mRNA_2516 0.34 -1.3