Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2275

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2274: 10642 - KOG2352 Predicted spermine/spermidine synthase, at 499245 to 500264 10642 mRNA_2275: 10643 - HMMPfam-MAPEG family-PF01124,SUPERFAMILY--SSF161084, at 500597 to 501422 10643 mRNA_2276: 10644 - K02954 RP-S14, MRPS14, rpsN small subunit ribosomal protein S14, at 501721 to 502247 10644

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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499,608 - 10642 mRNA_2274 0.36 0.2
499,615 + 10642 mRNA_2274 0.36 -0.4
499,625 - 10642 mRNA_2274 0.37 0.3
499,912 + 10642 mRNA_2274 0.65 -0.8
500,061 - 10642 mRNA_2274 0.80 -0.4
500,071 - 10642 mRNA_2274 0.81 0.4
500,248 + -0.4
500,361 - -2.2
500,397 + 1.4
500,398 + -0.2
500,401 + 1.6
500,434 + 1.5
500,522 - -0.2
500,532 + 2.3
500,537 + 0.5
500,540 + 1.0
500,556 - -0.1
500,663 + -0.5
500,668 + -0.7
500,688 - 10643 mRNA_2275 0.11 0.8
500,835 - 10643 mRNA_2275 0.29 0.3
500,986 - 10643 mRNA_2275 0.47 -0.9
501,124 + 10643 mRNA_2275 0.64 -0.2
501,377 + -0.1
502,297 - -3.8
502,300 + 0.2
502,301 + -1.0
502,310 + -0.6
502,311 - 0.2
502,416 + 0.1
502,422 + 1.7