Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2225

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400569 to 403367 10592 mRNA_2225: 10593 - Hypothetical Protein, at 403974 to 404899 10593 mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405486 to 409218 10594

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
403,168 + -0.3
403,550 - 0.1
403,574 - 1.8
403,613 - -1.2
403,709 + -0.4
403,735 + 0.1
403,736 + 0.0
403,740 + -0.4
403,743 - 1.8
403,746 + -1.8
403,753 + 0.7
403,780 - 0.0
403,843 - 1.3
403,870 + -1.3
403,870 - 0.4
403,873 - -1.9
403,876 - 0.4
403,880 - -0.2
403,900 + 0.8
403,906 + 0.5
403,908 + 0.4
403,909 + 0.6
403,911 + -0.3
403,920 - -0.9
403,922 - 0.2
403,925 + -1.7
404,054 + 0.1
404,075 - 10593 mRNA_2225 0.11 0.0
404,088 + 10593 mRNA_2225 0.12 0.5
404,093 + 10593 mRNA_2225 0.13 0.2
404,197 - 10593 mRNA_2225 0.24 -0.0
404,221 + 10593 mRNA_2225 0.27 0.1
404,223 - 10593 mRNA_2225 0.27 -0.3
404,223 - 10593 mRNA_2225 0.27 0.4
404,339 - 10593 mRNA_2225 0.39 -1.9
404,370 - 10593 mRNA_2225 0.43 -0.4
404,381 - 10593 mRNA_2225 0.44 -0.3
404,631 + 10593 mRNA_2225 0.71 0.5
404,634 - 10593 mRNA_2225 0.71 -0.1
404,671 + 10593 mRNA_2225 0.75 -1.6
405,099 + -0.2
405,199 - 0.2
405,356 - -2.5
405,358 + -0.8
405,368 - -3.8
405,372 + 2.5
405,395 + 0.3
405,674 - 0.5
405,801 - 2.2