Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1931

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542776 to 544439 10299 mRNA_1932: 10300 - BLAST family 69 glycosyltransferase [Melampsora larici-..., at 544727 to 545015 10300

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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541,787 + 0.9
541,804 + -1.1
541,875 + 0.8
541,910 + 0.7
541,911 - 0.6
541,912 + 0.2
541,933 + -0.3
541,964 - -0.0
541,976 + 0.9
541,987 + 2.3
542,008 + 0.2
542,070 - 0.3
542,094 - 0.7
542,105 + 0.2
542,110 - 0.4
542,111 - -0.0
542,115 + -0.8
542,132 + 0.6
542,147 - 0.2
542,148 + -0.1
542,151 - 0.2
542,227 + 1.4
542,242 - 2.2
542,249 - -2.1
542,252 - -0.2
542,261 - 0.3
542,273 + 0.9
542,295 + -1.3
542,297 + -0.4
542,324 - 1.6
542,372 + 0.0
542,375 - 0.2
542,377 + 1.0
542,384 + -0.9
542,399 - 1.1
542,403 - 0.8
542,404 + -0.1
542,407 + -0.6
542,407 - 0.1
542,408 + -0.0
542,409 + -0.1
542,410 - -0.1
542,411 - 1.6
542,414 + -0.2
542,417 - -0.9
542,417 - -0.3
542,421 + 0.7
542,424 - -1.0
542,424 - -2.4
542,426 - -0.4
542,428 - -0.5
542,428 + 0.3
542,431 + 0.4
542,446 + 0.5
542,451 + 0.5
542,452 - 0.0
542,452 - 1.6
542,454 - 0.4
542,467 - 0.5
542,470 + -0.1
542,478 - -0.3
542,484 - 0.6
542,485 - -0.0
542,485 - -1.2
542,485 - 0.7
542,497 + -2.5
542,501 - 2.3
542,506 - -0.2
542,515 + -0.4
542,520 + -0.1
542,521 + -0.1
542,522 + -0.1
542,527 - -0.0
542,530 + 0.3
542,533 + 0.7
542,538 + 0.1
542,547 - 0.0
542,548 - 0.7
542,568 + 0.7
542,582 + -1.9
542,620 - 0.2
542,631 - 0.2
542,632 + -0.6
542,642 + 0.1
542,647 - 0.5
542,647 - 1.1
542,653 - 0.1
542,654 + -1.8
542,658 - 0.4
542,662 - -0.9
542,662 - -0.9
542,663 + 0.1
542,671 - 0.5
542,672 - 0.2
542,672 - -0.3
542,672 - 0.3
542,679 - 0.5
542,680 + 0.7
542,682 + -0.2
542,686 - 0.5
542,687 - 1.2
542,688 + -0.0
542,689 + 1.0
542,692 + 1.5
542,693 + -1.0
542,703 - 0.7
542,704 + 0.1
542,705 - 0.1
542,707 + -1.5
542,708 - 0.3
542,710 - 0.4
542,731 + 0.3
542,739 - -0.1
542,742 + -0.3
542,782 + 1.5
542,822 + 0.1
542,851 + -1.2
542,863 - 0.8
542,989 - 10299 mRNA_1931 0.13 -1.4
542,989 + 10299 mRNA_1931 0.13 -1.8
543,026 + 10299 mRNA_1931 0.15 -2.6
543,133 - 10299 mRNA_1931 0.21 -1.1
543,135 + 10299 mRNA_1931 0.22 0.8
543,136 + 10299 mRNA_1931 0.22 -1.6
543,143 - 10299 mRNA_1931 0.22 -0.8
543,143 - 10299 mRNA_1931 0.22 -1.5
543,153 + 10299 mRNA_1931 0.23 -0.3
543,154 - 10299 mRNA_1931 0.23 -0.8
543,165 - 10299 mRNA_1931 0.23 0.2
543,174 + 10299 mRNA_1931 0.24 -0.4
543,234 + 10299 mRNA_1931 0.28 0.8
543,253 + 10299 mRNA_1931 0.29 -1.4
543,268 - 10299 mRNA_1931 0.30 -1.6
543,273 + 10299 mRNA_1931 0.30 -0.9
543,286 - 10299 mRNA_1931 0.31 -0.7
543,293 - 10299 mRNA_1931 0.31 0.0
543,294 + 10299 mRNA_1931 0.31 0.9
543,297 + 10299 mRNA_1931 0.31 -1.9
543,298 - 10299 mRNA_1931 0.31 -0.1
543,303 + 10299 mRNA_1931 0.32 -0.4
543,307 + 10299 mRNA_1931 0.32 1.1
543,307 - 10299 mRNA_1931 0.32 0.2
543,310 + 10299 mRNA_1931 0.32 -1.9
543,314 + 10299 mRNA_1931 0.32 0.0
543,315 - 10299 mRNA_1931 0.32 -1.4
543,323 - 10299 mRNA_1931 0.33 -0.7
543,323 - 10299 mRNA_1931 0.33 -0.0
543,324 + 10299 mRNA_1931 0.33 -1.8
543,324 + 10299 mRNA_1931 0.33 -0.9
543,328 + 10299 mRNA_1931 0.33 -0.3
543,331 + 10299 mRNA_1931 0.33 1.3
543,332 + 10299 mRNA_1931 0.33 -0.5
543,372 - 10299 mRNA_1931 0.36 0.1
543,382 - 10299 mRNA_1931 0.36 1.2
543,388 + 10299 mRNA_1931 0.37 -2.5
543,389 + 10299 mRNA_1931 0.37 -1.6
543,432 + 10299 mRNA_1931 0.39 0.0
543,447 - 10299 mRNA_1931 0.40 -0.4
543,454 - 10299 mRNA_1931 0.41 -0.3
543,459 - 10299 mRNA_1931 0.41 -1.6
543,460 - 10299 mRNA_1931 0.41 0.1
543,485 - 10299 mRNA_1931 0.43 -1.1
543,493 - 10299 mRNA_1931 0.43 -1.6
543,506 - 10299 mRNA_1931 0.44 1.0
543,527 - 10299 mRNA_1931 0.45 -0.8
543,613 + 10299 mRNA_1931 0.50 -0.6
543,616 - 10299 mRNA_1931 0.50 -0.1
543,737 - 10299 mRNA_1931 0.58 1.5
543,756 - 10299 mRNA_1931 0.59 0.3
544,055 - 10299 mRNA_1931 0.77 -0.4
544,203 + 10299 mRNA_1931 0.86 -1.8
544,346 - -0.1
544,363 - 0.9
544,483 + 2.3
544,489 + -2.3
544,505 + -0.1
544,509 + 1.0
544,630 + 0.8
544,667 - 0.4
544,770 + 10300 mRNA_1932 0.15 0.4
544,900 - 10300 mRNA_1932 0.60 0.1
544,943 + 10300 mRNA_1932 0.75 0.7
545,378 + 1.4