Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1911

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495564 to 497825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497993 to 499871 10279 mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500203 to 502614 10280

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
497,026 - 10278 mRNA_1910 0.65 -2.1
497,045 - 10278 mRNA_1910 0.65 0.2
497,612 + 0.6
497,615 + -0.1
497,903 - 0.0
497,906 + 0.3
497,915 - -0.2
497,916 + -0.8
497,932 + -1.5
497,934 + 0.8
498,067 + -1.2
498,072 - -1.3
498,512 + 10279 mRNA_1911 0.28 -0.5
499,112 + 10279 mRNA_1911 0.60 -0.9
499,125 + 10279 mRNA_1911 0.60 -1.3
499,291 + 10279 mRNA_1911 0.69 -0.9
499,407 - 10279 mRNA_1911 0.75 -2.1
499,546 - 10279 mRNA_1911 0.83 -0.6
499,684 - 0.5
499,692 - 0.7
499,857 + 1.8
499,859 + -0.1
500,024 + 1.9
500,154 - -1.1
500,305 - -1.7
500,439 + -1.6