Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1846

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1845: 10213 - K06127 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 355986 to 356917 10213 mRNA_1846: 10214 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 357162 to 359735 10214 mRNA_1847: 10215 - BLAST GDP-fucose protein O-fucosyltransferase [Rhizopogon v..., at 360311 to 362309 10215

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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356,934 - 0.0
357,121 - 0.9
357,148 - 1.6
357,384 - 0.8
357,728 + 10214 mRNA_1846 0.22 0.6
357,999 + 10214 mRNA_1846 0.33 0.8
358,010 + 10214 mRNA_1846 0.33 0.4
358,138 - 10214 mRNA_1846 0.38 0.7
358,448 + 10214 mRNA_1846 0.50 0.2
358,457 - 10214 mRNA_1846 0.50 0.8
358,713 - 10214 mRNA_1846 0.60 0.4
358,721 - 10214 mRNA_1846 0.61 1.4
358,731 + 10214 mRNA_1846 0.61 0.5
358,735 + 10214 mRNA_1846 0.61 0.3
358,882 - 10214 mRNA_1846 0.67 1.6
359,021 - 10214 mRNA_1846 0.72 -0.9
359,022 + 10214 mRNA_1846 0.72 0.5
359,168 + 10214 mRNA_1846 0.78 0.5
359,459 + 10214 mRNA_1846 0.89 0.3
359,471 - 10214 mRNA_1846 0.90 0.5
359,473 + 10214 mRNA_1846 0.90 0.4
359,492 + -0.5
359,503 + 1.0
359,595 - -0.9
359,598 + 1.2
359,606 + 0.5
359,609 - 0.6
359,624 + -0.4
359,731 - -0.7
359,759 - 0.7
359,776 + -1.2
359,781 - 0.8
359,786 + 0.5
359,788 + 0.5
359,902 + 1.3
359,902 - 1.0
359,909 + -1.0
359,912 + 0.7
359,915 + -0.2
359,954 + 0.9
359,961 - 0.2
360,001 + -1.2
360,003 - -0.5
360,003 + -0.1
360,022 - 1.2
360,032 + -1.3
360,047 + 1.5
360,051 + -0.9
360,057 - 2.1
360,060 + -1.3
360,070 - -1.5
360,071 + -2.2
360,073 + -0.8
360,077 + 0.9
360,087 + 0.5
360,093 - -2.2
360,093 + 0.5
360,105 + -0.3
360,105 + 0.3
360,115 - -0.2
360,132 + -1.5
360,135 - -0.2
360,140 - 0.5
360,147 + -0.5
360,148 - -1.6
360,148 - 0.9
360,148 - 0.5
360,149 + 0.0
360,150 - -0.4
360,151 + -0.3
360,151 + 0.3
360,156 + 0.0
360,156 + 0.0
360,157 + -0.1
360,160 - 0.2
360,160 + 0.2
360,161 - 0.3
360,161 + 0.1
360,161 - -0.6
360,165 + 0.7
360,168 + -0.6
360,171 + 2.2
360,175 + -0.3
360,175 + -0.4
360,177 + -0.8
360,177 + -1.0
360,181 - -2.1
360,181 - -1.6
360,186 - -1.6
360,187 + 0.2
360,192 - -0.8
360,199 - -1.6
360,201 + -0.2
360,203 - -1.0
360,203 + 2.3
360,203 - 0.2
360,204 - 0.2
360,204 + 0.3
360,204 + -0.4
360,205 - -1.3
360,213 - 1.2
360,224 - -0.1
360,232 - 0.2
360,233 + 0.0
360,237 + 0.4
360,241 + -0.2
360,241 + 0.0
360,242 + 0.3
360,242 - -0.4
360,243 - -0.5
360,244 - 2.7
360,244 - 0.3
360,246 + 1.9
360,246 + 0.0
360,246 + -0.6
360,249 + 0.6
360,249 - -2.0
360,251 + -1.4
360,251 + -0.4
360,252 + -2.7
360,254 - -0.1
360,256 + 0.2
360,260 + 1.0
360,260 - -1.1
360,263 + -0.7
360,264 - 0.3
360,265 + 0.3
360,267 - 0.4
360,268 + -0.6
360,268 + -0.3
360,268 + 0.8
360,268 + -3.7
360,269 + -0.5
360,269 - 0.1
360,272 - 0.5
360,274 - 0.5
360,276 - -2.4
360,277 - -0.1
360,280 - -0.0
360,285 - 0.9
360,290 + 1.6
360,304 + -0.4
360,417 - 0.7
360,431 - 3.1
360,442 + -0.3
360,558 + 10215 mRNA_1847 0.12 0.5
360,691 - 10215 mRNA_1847 0.19 0.1