Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1822

Experiments: Sorted No BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294810 to 296545 10190

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
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293,854 - 10189 mRNA_1821 0.89 -1.6
293,983 - -0.3
294,137 - 0.2
294,190 - -1.8
294,407 - 1.8
294,410 + 0.7
294,451 + -1.0
294,562 - 2.6
295,045 - 10190 mRNA_1822 0.14 -2.1
295,911 + 10190 mRNA_1822 0.63 -0.3
295,949 + 10190 mRNA_1822 0.66 -3.5
296,067 - 10190 mRNA_1822 0.72 1.0
296,194 - 10190 mRNA_1822 0.80 -0.3
296,212 - 10190 mRNA_1822 0.81 0.1
296,230 - 10190 mRNA_1822 0.82 0.7
296,234 - 10190 mRNA_1822 0.82 -0.4
296,277 - 10190 mRNA_1822 0.85 0.1
296,286 - 10190 mRNA_1822 0.85 -2.2
296,389 + -0.6
296,395 - -0.4
296,396 - -1.0
296,423 + -0.6
296,533 + 0.2
296,535 + 0.9
296,539 + -1.4
296,554 + 0.4
296,554 - 0.5
296,557 - 1.9
296,568 + 0.5
296,581 - -1.7
296,601 + -1.9
296,693 + 0.9
296,707 - 0.4
296,708 + -0.2
296,718 + -0.1
296,720 + -1.2
296,728 - 0.4
296,738 + 0.1
296,743 + 0.2
296,744 + -0.1
296,745 - -2.4
296,752 + 1.0
296,756 + -0.3
296,760 - -0.9
296,763 + -0.6
296,763 + 1.0
296,800 - -1.7
296,868 - 0.7
296,874 - 0.6
296,876 - 0.2
296,879 + 0.7
296,879 + -0.7
296,883 - -1.9
296,885 - -0.3
296,893 - 0.0
297,020 + -1.3
297,036 + -0.5
297,049 + 0.2
297,082 - 0.3
297,086 + 0.5
297,088 + -1.8
297,089 + 1.1
297,110 + 0.5
297,113 + 1.3
297,132 - -0.7
297,133 + 0.9
297,144 - 0.6
297,149 + -0.0
297,153 - 0.0
297,156 + 0.5
297,157 - -1.2
297,158 - -0.9
297,164 - -0.6
297,195 - -0.1
297,206 - -0.3
297,207 + 0.0
297,209 - -0.2
297,209 + 1.4
297,210 + 0.8
297,213 - 0.2
297,229 + 0.8
297,257 - 0.5
297,267 + -3.0
297,305 + 0.8
297,329 - 0.7
297,340 + 1.5
297,344 - 0.2
297,371 - -0.1
297,379 + -0.5
297,389 + -1.0
297,392 + -1.6
297,490 + -1.2
297,509 - -1.3
297,514 + -0.3
297,541 - 0.2