Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1779

Experiments: Sorted No BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1778: 10146 - HMMPfam-Protein of unknown function (DUF3140)-PF11338, at 183899 to 184487 10146 mRNA_1779: 10147 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 185059 to 187419 10147 mRNA_1780: 10148 - K03097 CSNK2A casein kinase II subunit alpha, at 188095 to 190025 10148

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted No BODIPY Gate
remove
184,417 - 10146 mRNA_1778 0.88 0.5
184,427 - 10146 mRNA_1778 0.90 0.4
184,433 + 1.7
184,565 + 0.6
184,845 - 1.8
184,853 + -3.4
184,856 - 0.7
184,881 + 1.2
184,882 - -0.4
184,883 + 0.2
184,891 + 1.6
184,894 - -1.6
184,898 - 0.6
184,899 - -2.3
184,933 - -1.7
184,954 + -0.4
185,068 - -0.6
185,079 - 0.6
185,245 + -0.4
185,257 + 0.4
185,259 - -0.4
185,402 + 10147 mRNA_1779 0.15 -1.1
185,452 - 10147 mRNA_1779 0.17 -1.5
185,466 + 10147 mRNA_1779 0.17 -0.5
185,492 - 10147 mRNA_1779 0.18 1.9
185,496 - 10147 mRNA_1779 0.19 -0.2
185,563 - 10147 mRNA_1779 0.21 -1.2
185,795 - 10147 mRNA_1779 0.31 -2.0
185,964 - 10147 mRNA_1779 0.38 1.5
186,055 - 10147 mRNA_1779 0.42 0.0
186,229 - 10147 mRNA_1779 0.50 -0.7
186,345 + 10147 mRNA_1779 0.54 0.4
186,625 - 10147 mRNA_1779 0.66 1.1
186,726 + 10147 mRNA_1779 0.71 -1.0
186,749 + 10147 mRNA_1779 0.72 0.2
186,783 + 10147 mRNA_1779 0.73 -1.9
186,795 + 10147 mRNA_1779 0.74 1.2
187,213 + -1.8
187,404 + 0.2
187,485 + -0.6
187,515 - -0.4
187,627 - -1.0
187,631 - 0.5
187,653 + 0.4
187,671 + 0.8
187,677 - -0.2
187,681 - -3.8
187,684 - 1.1
187,731 - 1.7
187,733 - -1.2
187,736 - -0.9
187,739 + 0.4
187,748 - -1.5
187,750 + 0.4
187,750 - -0.3
187,758 - -0.2
187,762 - -0.5
187,763 + 0.5
187,789 - 0.8
187,798 + 1.5
187,814 + 0.1
187,820 + -0.8
187,956 + -0.7
187,970 + 0.1